Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
RBFOX3A6NFN3 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC17.99■□□□□ 0.47
RBFOX3A6NFN3 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RBFOX3A6NFN3 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RBFOX3A6NFN3 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
RBFOX3A6NFN3 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
RBFOX3A6NFN3 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC17.99■□□□□ 0.47
RBFOX3A6NFN3 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
RBFOX3A6NFN3 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RBFOX3A6NFN3 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC17.99■□□□□ 0.47
RBFOX3A6NFN3 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RBFOX3A6NFN3 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RBFOX3A6NFN3 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
RBFOX3A6NFN3 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC17.99■□□□□ 0.47
RBFOX3A6NFN3 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RBFOX3A6NFN3 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RBFOX3A6NFN3 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RBFOX3A6NFN3 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RBFOX3A6NFN3 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
RBFOX3A6NFN3 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC17.98■□□□□ 0.47
RBFOX3A6NFN3 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC17.98■□□□□ 0.47
RBFOX3A6NFN3 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC17.98■□□□□ 0.47
RBFOX3A6NFN3 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RBFOX3A6NFN3 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC17.98■□□□□ 0.47
RBFOX3A6NFN3 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RBFOX3A6NFN3 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RBFOX3A6NFN3 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RBFOX3A6NFN3 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RBFOX3A6NFN3 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC17.97■□□□□ 0.47
RBFOX3A6NFN3 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
RBFOX3A6NFN3 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RBFOX3A6NFN3 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
RBFOX3A6NFN3 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
RBFOX3A6NFN3 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
RBFOX3A6NFN3 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RBFOX3A6NFN3 BID-212ENST00000614949 1988 ntTSL 5 BASIC17.97■□□□□ 0.47
RBFOX3A6NFN3 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
RBFOX3A6NFN3 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
RBFOX3A6NFN3 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
RBFOX3A6NFN3 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC17.96■□□□□ 0.47
RBFOX3A6NFN3 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RBFOX3A6NFN3 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
RBFOX3A6NFN3 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RBFOX3A6NFN3 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC17.96■□□□□ 0.47
RBFOX3A6NFN3 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
RBFOX3A6NFN3 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RBFOX3A6NFN3 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.46
RBFOX3A6NFN3 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC17.96■□□□□ 0.46
RBFOX3A6NFN3 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
RBFOX3A6NFN3 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
RBFOX3A6NFN3 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC17.95■□□□□ 0.46
RBFOX3A6NFN3 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RBFOX3A6NFN3 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RBFOX3A6NFN3 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
RBFOX3A6NFN3 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RBFOX3A6NFN3 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RBFOX3A6NFN3 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC17.95■□□□□ 0.46
RBFOX3A6NFN3 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RBFOX3A6NFN3 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RBFOX3A6NFN3 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RBFOX3A6NFN3 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RBFOX3A6NFN3 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RBFOX3A6NFN3 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC17.94■□□□□ 0.46
RBFOX3A6NFN3 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RBFOX3A6NFN3 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RBFOX3A6NFN3 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RBFOX3A6NFN3 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RBFOX3A6NFN3 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RBFOX3A6NFN3 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
RBFOX3A6NFN3 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
RBFOX3A6NFN3 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RBFOX3A6NFN3 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
RBFOX3A6NFN3 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC17.94■□□□□ 0.46
RBFOX3A6NFN3 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RBFOX3A6NFN3 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
RBFOX3A6NFN3 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC17.93■□□□□ 0.46
RBFOX3A6NFN3 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
RBFOX3A6NFN3 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
RBFOX3A6NFN3 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC17.93■□□□□ 0.46
RBFOX3A6NFN3 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RBFOX3A6NFN3 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
RBFOX3A6NFN3 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC17.93■□□□□ 0.46
RBFOX3A6NFN3 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RBFOX3A6NFN3 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
RBFOX3A6NFN3 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RBFOX3A6NFN3 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RBFOX3A6NFN3 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RBFOX3A6NFN3 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RBFOX3A6NFN3 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RBFOX3A6NFN3 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RBFOX3A6NFN3 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
RBFOX3A6NFN3 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RBFOX3A6NFN3 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
RBFOX3A6NFN3 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
RBFOX3A6NFN3 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RBFOX3A6NFN3 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
RBFOX3A6NFN3 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC17.91■□□□□ 0.46
RBFOX3A6NFN3 ESRRAP2-201ENST00000418437 1549 ntBASIC17.91■□□□□ 0.46
RBFOX3A6NFN3 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RBFOX3A6NFN3 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms