Protein–RNA interactions for Protein: A6NCQ9

RNF222, RING finger protein 222, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF222A6NCQ9 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF222A6NCQ9 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF222A6NCQ9 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RNF222A6NCQ9 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF222A6NCQ9 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC18.59■□□□□ 0.57
RNF222A6NCQ9 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF222A6NCQ9 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
RNF222A6NCQ9 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF222A6NCQ9 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RNF222A6NCQ9 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RNF222A6NCQ9 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
RNF222A6NCQ9 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RNF222A6NCQ9 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.58■□□□□ 0.57
RNF222A6NCQ9 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RNF222A6NCQ9 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
RNF222A6NCQ9 ESRRAP2-201ENST00000418437 1549 ntBASIC18.58■□□□□ 0.56
RNF222A6NCQ9 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
RNF222A6NCQ9 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
RNF222A6NCQ9 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
RNF222A6NCQ9 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF222A6NCQ9 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF222A6NCQ9 FBXW4P1-201ENST00000426721 2239 ntBASIC18.57■□□□□ 0.56
RNF222A6NCQ9 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF222A6NCQ9 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC18.57■□□□□ 0.56
RNF222A6NCQ9 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC18.57■□□□□ 0.56
RNF222A6NCQ9 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF222A6NCQ9 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF222A6NCQ9 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC18.57■□□□□ 0.56
RNF222A6NCQ9 GCA-201ENST00000233612 1694 ntTSL 2 BASIC18.57■□□□□ 0.56
RNF222A6NCQ9 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF222A6NCQ9 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNF222A6NCQ9 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
RNF222A6NCQ9 C11orf96-202ENST00000528572 1834 ntBASIC18.56■□□□□ 0.56
RNF222A6NCQ9 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RNF222A6NCQ9 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF222A6NCQ9 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC18.55■□□□□ 0.56
RNF222A6NCQ9 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC18.55■□□□□ 0.56
RNF222A6NCQ9 AC148477.6-201ENST00000623746 465 ntBASIC18.55■□□□□ 0.56
RNF222A6NCQ9 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF222A6NCQ9 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC18.55■□□□□ 0.56
RNF222A6NCQ9 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF222A6NCQ9 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC18.55■□□□□ 0.56
RNF222A6NCQ9 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
RNF222A6NCQ9 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF222A6NCQ9 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RNF222A6NCQ9 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNF222A6NCQ9 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RNF222A6NCQ9 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF222A6NCQ9 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF222A6NCQ9 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF222A6NCQ9 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF222A6NCQ9 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
RNF222A6NCQ9 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF222A6NCQ9 H19-210ENST00000439725 1929 ntTSL 2 BASIC18.54■□□□□ 0.56
RNF222A6NCQ9 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RNF222A6NCQ9 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
RNF222A6NCQ9 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNF222A6NCQ9 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
RNF222A6NCQ9 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC18.53■□□□□ 0.56
RNF222A6NCQ9 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
RNF222A6NCQ9 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC18.53■□□□□ 0.56
RNF222A6NCQ9 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNF222A6NCQ9 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
RNF222A6NCQ9 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNF222A6NCQ9 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNF222A6NCQ9 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RNF222A6NCQ9 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC18.52■□□□□ 0.56
RNF222A6NCQ9 EI24-213ENST00000618552 1747 ntTSL 5 BASIC18.52■□□□□ 0.56
RNF222A6NCQ9 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
RNF222A6NCQ9 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RNF222A6NCQ9 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
RNF222A6NCQ9 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RNF222A6NCQ9 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RNF222A6NCQ9 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
RNF222A6NCQ9 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RNF222A6NCQ9 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
RNF222A6NCQ9 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC18.52■□□□□ 0.55
RNF222A6NCQ9 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
RNF222A6NCQ9 AC139530.1-201ENST00000575312 1977 ntBASIC18.51■□□□□ 0.55
RNF222A6NCQ9 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RNF222A6NCQ9 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF222A6NCQ9 PALM-208ENST00000592155 2272 ntTSL 4 BASIC18.51■□□□□ 0.55
RNF222A6NCQ9 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF222A6NCQ9 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF222A6NCQ9 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RNF222A6NCQ9 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RNF222A6NCQ9 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RNF222A6NCQ9 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF222A6NCQ9 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC18.5■□□□□ 0.55
RNF222A6NCQ9 AC026310.3-201ENST00000625186 2373 ntBASIC18.5■□□□□ 0.55
RNF222A6NCQ9 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
RNF222A6NCQ9 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF222A6NCQ9 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
RNF222A6NCQ9 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC18.5■□□□□ 0.55
RNF222A6NCQ9 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF222A6NCQ9 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC18.5■□□□□ 0.55
RNF222A6NCQ9 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RNF222A6NCQ9 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF222A6NCQ9 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
RNF222A6NCQ9 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms