Protein–RNA interactions for Protein: A0A0K0K1A3

TRBV10-1, T-cell receptor beta variable 10-1(gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV10-1A0A0K0K1A3 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV10-1A0A0K0K1A3 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC16.06■□□□□ 0.16
TRBV10-1A0A0K0K1A3 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV10-1A0A0K0K1A3 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC16.06■□□□□ 0.16
TRBV10-1A0A0K0K1A3 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV10-1A0A0K0K1A3 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
TRBV10-1A0A0K0K1A3 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV10-1A0A0K0K1A3 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV10-1A0A0K0K1A3 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV10-1A0A0K0K1A3 BHLHE23-202ENST00000612929 1109 ntBASIC16.06■□□□□ 0.16
TRBV10-1A0A0K0K1A3 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
TRBV10-1A0A0K0K1A3 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV10-1A0A0K0K1A3 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC16.05■□□□□ 0.16
TRBV10-1A0A0K0K1A3 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV10-1A0A0K0K1A3 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV10-1A0A0K0K1A3 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC16.05■□□□□ 0.16
TRBV10-1A0A0K0K1A3 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC16.05■□□□□ 0.16
TRBV10-1A0A0K0K1A3 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV10-1A0A0K0K1A3 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV10-1A0A0K0K1A3 IDNK-201ENST00000376417 511 ntTSL 5 BASIC16.05■□□□□ 0.16
TRBV10-1A0A0K0K1A3 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV10-1A0A0K0K1A3 LBH-205ENST00000407930 756 ntTSL 2 BASIC16.05■□□□□ 0.16
TRBV10-1A0A0K0K1A3 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV10-1A0A0K0K1A3 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
TRBV10-1A0A0K0K1A3 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV10-1A0A0K0K1A3 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV10-1A0A0K0K1A3 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
TRBV10-1A0A0K0K1A3 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
TRBV10-1A0A0K0K1A3 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
TRBV10-1A0A0K0K1A3 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC16.04■□□□□ 0.16
TRBV10-1A0A0K0K1A3 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
TRBV10-1A0A0K0K1A3 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV10-1A0A0K0K1A3 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV10-1A0A0K0K1A3 KRT18P24-201ENST00000344739 1156 ntBASIC16.04■□□□□ 0.16
TRBV10-1A0A0K0K1A3 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC16.04■□□□□ 0.16
TRBV10-1A0A0K0K1A3 DUX4L18-201ENST00000553347 1267 ntBASIC16.04■□□□□ 0.16
TRBV10-1A0A0K0K1A3 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV10-1A0A0K0K1A3 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC16.04■□□□□ 0.16
TRBV10-1A0A0K0K1A3 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
TRBV10-1A0A0K0K1A3 DUSP8P3-201ENST00000399571 1760 ntBASIC16.04■□□□□ 0.16
TRBV10-1A0A0K0K1A3 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV10-1A0A0K0K1A3 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV10-1A0A0K0K1A3 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV10-1A0A0K0K1A3 EI24-204ENST00000527235 1625 ntTSL 5 BASIC16.04■□□□□ 0.16
TRBV10-1A0A0K0K1A3 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
TRBV10-1A0A0K0K1A3 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRBV10-1A0A0K0K1A3 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRBV10-1A0A0K0K1A3 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRBV10-1A0A0K0K1A3 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
TRBV10-1A0A0K0K1A3 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRBV10-1A0A0K0K1A3 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
TRBV10-1A0A0K0K1A3 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRBV10-1A0A0K0K1A3 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRBV10-1A0A0K0K1A3 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC16.03■□□□□ 0.16
TRBV10-1A0A0K0K1A3 AC120024.1-201ENST00000562672 995 ntBASIC16.03■□□□□ 0.16
TRBV10-1A0A0K0K1A3 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC16.03■□□□□ 0.16
TRBV10-1A0A0K0K1A3 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRBV10-1A0A0K0K1A3 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRBV10-1A0A0K0K1A3 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRBV10-1A0A0K0K1A3 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRBV10-1A0A0K0K1A3 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRBV10-1A0A0K0K1A3 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC16.03■□□□□ 0.16
TRBV10-1A0A0K0K1A3 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRBV10-1A0A0K0K1A3 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRBV10-1A0A0K0K1A3 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
TRBV10-1A0A0K0K1A3 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC16.02■□□□□ 0.16
TRBV10-1A0A0K0K1A3 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRBV10-1A0A0K0K1A3 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRBV10-1A0A0K0K1A3 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
TRBV10-1A0A0K0K1A3 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC16.02■□□□□ 0.16
TRBV10-1A0A0K0K1A3 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC16.02■□□□□ 0.16
TRBV10-1A0A0K0K1A3 THA1P-201ENST00000590384 1145 ntBASIC16.02■□□□□ 0.16
TRBV10-1A0A0K0K1A3 ME2-208ENST00000638937 2471 ntTSL 5 BASIC16.02■□□□□ 0.15
TRBV10-1A0A0K0K1A3 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRBV10-1A0A0K0K1A3 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC16.02■□□□□ 0.15
TRBV10-1A0A0K0K1A3 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
TRBV10-1A0A0K0K1A3 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
TRBV10-1A0A0K0K1A3 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC16.01■□□□□ 0.15
TRBV10-1A0A0K0K1A3 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRBV10-1A0A0K0K1A3 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRBV10-1A0A0K0K1A3 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRBV10-1A0A0K0K1A3 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRBV10-1A0A0K0K1A3 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRBV10-1A0A0K0K1A3 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
TRBV10-1A0A0K0K1A3 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRBV10-1A0A0K0K1A3 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRBV10-1A0A0K0K1A3 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRBV10-1A0A0K0K1A3 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRBV10-1A0A0K0K1A3 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRBV10-1A0A0K0K1A3 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC16■□□□□ 0.15
TRBV10-1A0A0K0K1A3 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
TRBV10-1A0A0K0K1A3 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
TRBV10-1A0A0K0K1A3 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRBV10-1A0A0K0K1A3 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRBV10-1A0A0K0K1A3 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
TRBV10-1A0A0K0K1A3 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRBV10-1A0A0K0K1A3 ATP5G2P3-201ENST00000429083 425 ntBASIC16■□□□□ 0.15
TRBV10-1A0A0K0K1A3 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC16■□□□□ 0.15
TRBV10-1A0A0K0K1A3 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC16■□□□□ 0.15
TRBV10-1A0A0K0K1A3 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms