Protein–RNA interactions for Protein: A0A0B4J276

TRAV25, T-cell receptor alpha variable 25 (Fragment), humanhuman

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV25A0A0B4J276 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC17.14■□□□□ 0.33
TRAV25A0A0B4J276 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV25A0A0B4J276 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC17.14■□□□□ 0.33
TRAV25A0A0B4J276 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV25A0A0B4J276 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC17.13■□□□□ 0.33
TRAV25A0A0B4J276 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC17.13■□□□□ 0.33
TRAV25A0A0B4J276 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV25A0A0B4J276 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV25A0A0B4J276 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV25A0A0B4J276 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
TRAV25A0A0B4J276 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV25A0A0B4J276 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV25A0A0B4J276 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
TRAV25A0A0B4J276 AL117332.1-201ENST00000622628 974 ntBASIC17.13■□□□□ 0.33
TRAV25A0A0B4J276 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC17.13■□□□□ 0.33
TRAV25A0A0B4J276 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC17.13■□□□□ 0.33
TRAV25A0A0B4J276 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV25A0A0B4J276 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV25A0A0B4J276 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV25A0A0B4J276 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
TRAV25A0A0B4J276 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
TRAV25A0A0B4J276 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC17.12■□□□□ 0.33
TRAV25A0A0B4J276 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC17.12■□□□□ 0.33
TRAV25A0A0B4J276 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV25A0A0B4J276 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV25A0A0B4J276 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV25A0A0B4J276 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
TRAV25A0A0B4J276 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
TRAV25A0A0B4J276 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC17.11■□□□□ 0.33
TRAV25A0A0B4J276 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC17.11■□□□□ 0.33
TRAV25A0A0B4J276 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC17.11■□□□□ 0.33
TRAV25A0A0B4J276 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC17.11■□□□□ 0.33
TRAV25A0A0B4J276 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC17.11■□□□□ 0.33
TRAV25A0A0B4J276 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV25A0A0B4J276 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
TRAV25A0A0B4J276 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
TRAV25A0A0B4J276 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC17.11■□□□□ 0.33
TRAV25A0A0B4J276 EI24-204ENST00000527235 1625 ntTSL 5 BASIC17.1■□□□□ 0.33
TRAV25A0A0B4J276 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV25A0A0B4J276 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
TRAV25A0A0B4J276 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC17.1■□□□□ 0.33
TRAV25A0A0B4J276 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC17.1■□□□□ 0.33
TRAV25A0A0B4J276 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV25A0A0B4J276 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC17.1■□□□□ 0.33
TRAV25A0A0B4J276 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV25A0A0B4J276 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
TRAV25A0A0B4J276 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV25A0A0B4J276 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC17.09■□□□□ 0.33
TRAV25A0A0B4J276 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV25A0A0B4J276 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC17.09■□□□□ 0.33
TRAV25A0A0B4J276 SRR-208ENST00000576848 588 ntTSL 4 BASIC17.09■□□□□ 0.33
TRAV25A0A0B4J276 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC17.09■□□□□ 0.33
TRAV25A0A0B4J276 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC17.09■□□□□ 0.33
TRAV25A0A0B4J276 SHD-204ENST00000599689 1729 ntTSL 5 BASIC17.09■□□□□ 0.33
TRAV25A0A0B4J276 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
TRAV25A0A0B4J276 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
TRAV25A0A0B4J276 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV25A0A0B4J276 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRAV25A0A0B4J276 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRAV25A0A0B4J276 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRAV25A0A0B4J276 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV25A0A0B4J276 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC17.08■□□□□ 0.32
TRAV25A0A0B4J276 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
TRAV25A0A0B4J276 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC17.08■□□□□ 0.32
TRAV25A0A0B4J276 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC17.08■□□□□ 0.32
TRAV25A0A0B4J276 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV25A0A0B4J276 RPP21-222ENST00000433076 577 ntTSL 2 BASIC17.08■□□□□ 0.32
TRAV25A0A0B4J276 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV25A0A0B4J276 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC17.08■□□□□ 0.32
TRAV25A0A0B4J276 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV25A0A0B4J276 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV25A0A0B4J276 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC17.07■□□□□ 0.32
TRAV25A0A0B4J276 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC17.07■□□□□ 0.32
TRAV25A0A0B4J276 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
TRAV25A0A0B4J276 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC17.07■□□□□ 0.32
TRAV25A0A0B4J276 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV25A0A0B4J276 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV25A0A0B4J276 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV25A0A0B4J276 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV25A0A0B4J276 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV25A0A0B4J276 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV25A0A0B4J276 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV25A0A0B4J276 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV25A0A0B4J276 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV25A0A0B4J276 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC17.06■□□□□ 0.32
TRAV25A0A0B4J276 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC17.06■□□□□ 0.32
TRAV25A0A0B4J276 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC17.06■□□□□ 0.32
TRAV25A0A0B4J276 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC17.06■□□□□ 0.32
TRAV25A0A0B4J276 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV25A0A0B4J276 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC17.06■□□□□ 0.32
TRAV25A0A0B4J276 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV25A0A0B4J276 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC17.06■□□□□ 0.32
TRAV25A0A0B4J276 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
TRAV25A0A0B4J276 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV25A0A0B4J276 EI24-213ENST00000618552 1747 ntTSL 5 BASIC17.05■□□□□ 0.32
TRAV25A0A0B4J276 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV25A0A0B4J276 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC17.05■□□□□ 0.32
TRAV25A0A0B4J276 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
TRAV25A0A0B4J276 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV25A0A0B4J276 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms