Protein–RNA interactions for Protein: A0A0B4J1U4

TRGV5, T-cell receptor gamma variable 5 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV5A0A0B4J1U4 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.54■□□□□ 0.88
TRGV5A0A0B4J1U4 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRGV5A0A0B4J1U4 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TRGV5A0A0B4J1U4 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRGV5A0A0B4J1U4 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRGV5A0A0B4J1U4 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRGV5A0A0B4J1U4 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.53■□□□□ 0.88
TRGV5A0A0B4J1U4 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.53■□□□□ 0.88
TRGV5A0A0B4J1U4 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.53■□□□□ 0.88
TRGV5A0A0B4J1U4 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC20.53■□□□□ 0.88
TRGV5A0A0B4J1U4 AC135279.3-201ENST00000610945 1311 ntBASIC20.53■□□□□ 0.88
TRGV5A0A0B4J1U4 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC20.52■□□□□ 0.88
TRGV5A0A0B4J1U4 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.52■□□□□ 0.88
TRGV5A0A0B4J1U4 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
TRGV5A0A0B4J1U4 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC20.52■□□□□ 0.87
TRGV5A0A0B4J1U4 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRGV5A0A0B4J1U4 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.51■□□□□ 0.87
TRGV5A0A0B4J1U4 ALDH1A3-203ENST00000557963 1670 ntBASIC20.51■□□□□ 0.87
TRGV5A0A0B4J1U4 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRGV5A0A0B4J1U4 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRGV5A0A0B4J1U4 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.51■□□□□ 0.87
TRGV5A0A0B4J1U4 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRGV5A0A0B4J1U4 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.51■□□□□ 0.87
TRGV5A0A0B4J1U4 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
TRGV5A0A0B4J1U4 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRGV5A0A0B4J1U4 AC138932.3-201ENST00000567634 1902 ntBASIC20.51■□□□□ 0.87
TRGV5A0A0B4J1U4 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRGV5A0A0B4J1U4 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TRGV5A0A0B4J1U4 AC135731.1-201ENST00000569415 2548 ntBASIC20.5■□□□□ 0.87
TRGV5A0A0B4J1U4 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.5■□□□□ 0.87
TRGV5A0A0B4J1U4 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
TRGV5A0A0B4J1U4 SYT6-210ENST00000641643 1587 ntBASIC20.5■□□□□ 0.87
TRGV5A0A0B4J1U4 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRGV5A0A0B4J1U4 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TRGV5A0A0B4J1U4 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
TRGV5A0A0B4J1U4 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
TRGV5A0A0B4J1U4 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.49■□□□□ 0.87
TRGV5A0A0B4J1U4 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.49■□□□□ 0.87
TRGV5A0A0B4J1U4 AC024257.2-201ENST00000549699 147 ntBASIC20.49■□□□□ 0.87
TRGV5A0A0B4J1U4 AC099791.2-201ENST00000605725 427 ntBASIC20.49■□□□□ 0.87
TRGV5A0A0B4J1U4 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRGV5A0A0B4J1U4 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRGV5A0A0B4J1U4 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.49■□□□□ 0.87
TRGV5A0A0B4J1U4 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.49■□□□□ 0.87
TRGV5A0A0B4J1U4 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TRGV5A0A0B4J1U4 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRGV5A0A0B4J1U4 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
TRGV5A0A0B4J1U4 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.48■□□□□ 0.87
TRGV5A0A0B4J1U4 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRGV5A0A0B4J1U4 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.48■□□□□ 0.87
TRGV5A0A0B4J1U4 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.48■□□□□ 0.87
TRGV5A0A0B4J1U4 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.48■□□□□ 0.87
TRGV5A0A0B4J1U4 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TRGV5A0A0B4J1U4 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.48■□□□□ 0.87
TRGV5A0A0B4J1U4 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TRGV5A0A0B4J1U4 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRGV5A0A0B4J1U4 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRGV5A0A0B4J1U4 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRGV5A0A0B4J1U4 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.47■□□□□ 0.87
TRGV5A0A0B4J1U4 AC142381.2-201ENST00000566120 298 ntBASIC20.47■□□□□ 0.87
TRGV5A0A0B4J1U4 C17orf82-201ENST00000623772 1530 ntBASIC20.47■□□□□ 0.87
TRGV5A0A0B4J1U4 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRGV5A0A0B4J1U4 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRGV5A0A0B4J1U4 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRGV5A0A0B4J1U4 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.47■□□□□ 0.87
TRGV5A0A0B4J1U4 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TRGV5A0A0B4J1U4 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC20.46■□□□□ 0.87
TRGV5A0A0B4J1U4 SHF-207ENST00000560540 2062 ntTSL 5 BASIC20.46■□□□□ 0.87
TRGV5A0A0B4J1U4 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.46■□□□□ 0.87
TRGV5A0A0B4J1U4 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRGV5A0A0B4J1U4 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TRGV5A0A0B4J1U4 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.46■□□□□ 0.87
TRGV5A0A0B4J1U4 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRGV5A0A0B4J1U4 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.46■□□□□ 0.87
TRGV5A0A0B4J1U4 AC020928.2-201ENST00000588717 2197 ntBASIC20.46■□□□□ 0.87
TRGV5A0A0B4J1U4 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TRGV5A0A0B4J1U4 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRGV5A0A0B4J1U4 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.46■□□□□ 0.87
TRGV5A0A0B4J1U4 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRGV5A0A0B4J1U4 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRGV5A0A0B4J1U4 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.46■□□□□ 0.87
TRGV5A0A0B4J1U4 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.45■□□□□ 0.87
TRGV5A0A0B4J1U4 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRGV5A0A0B4J1U4 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRGV5A0A0B4J1U4 EDA-201ENST00000338901 1233 ntBASIC20.45■□□□□ 0.86
TRGV5A0A0B4J1U4 MIR935-201ENST00000401179 91 ntBASIC20.45■□□□□ 0.86
TRGV5A0A0B4J1U4 AC241377.3-202ENST00000626088 1088 ntBASIC20.45■□□□□ 0.86
TRGV5A0A0B4J1U4 AC241585.3-202ENST00000628937 1088 ntBASIC20.45■□□□□ 0.86
TRGV5A0A0B4J1U4 AC245100.8-202ENST00000629247 1058 ntBASIC20.45■□□□□ 0.86
TRGV5A0A0B4J1U4 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TRGV5A0A0B4J1U4 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRGV5A0A0B4J1U4 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.45■□□□□ 0.86
TRGV5A0A0B4J1U4 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC20.44■□□□□ 0.86
TRGV5A0A0B4J1U4 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRGV5A0A0B4J1U4 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TRGV5A0A0B4J1U4 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.44■□□□□ 0.86
TRGV5A0A0B4J1U4 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.44■□□□□ 0.86
TRGV5A0A0B4J1U4 AL355001.2-201ENST00000620617 1191 ntBASIC20.44■□□□□ 0.86
TRGV5A0A0B4J1U4 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRGV5A0A0B4J1U4 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms