Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV30A0A087WSZ9 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV30A0A087WSZ9 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV30A0A087WSZ9 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV30A0A087WSZ9 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV30A0A087WSZ9 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV30A0A087WSZ9 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV30A0A087WSZ9 BHLHE23-202ENST00000612929 1109 ntBASIC17.81■□□□□ 0.44
TRAV30A0A087WSZ9 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC17.81■□□□□ 0.44
TRAV30A0A087WSZ9 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV30A0A087WSZ9 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV30A0A087WSZ9 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV30A0A087WSZ9 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV30A0A087WSZ9 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
TRAV30A0A087WSZ9 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV30A0A087WSZ9 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC17.81■□□□□ 0.44
TRAV30A0A087WSZ9 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
TRAV30A0A087WSZ9 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC17.8■□□□□ 0.44
TRAV30A0A087WSZ9 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV30A0A087WSZ9 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV30A0A087WSZ9 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV30A0A087WSZ9 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
TRAV30A0A087WSZ9 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV30A0A087WSZ9 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV30A0A087WSZ9 GAK-223ENST00000628912 497 ntTSL 5 BASIC17.8■□□□□ 0.44
TRAV30A0A087WSZ9 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV30A0A087WSZ9 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
TRAV30A0A087WSZ9 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV30A0A087WSZ9 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV30A0A087WSZ9 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC17.8■□□□□ 0.44
TRAV30A0A087WSZ9 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC17.79■□□□□ 0.44
TRAV30A0A087WSZ9 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV30A0A087WSZ9 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV30A0A087WSZ9 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV30A0A087WSZ9 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV30A0A087WSZ9 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV30A0A087WSZ9 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV30A0A087WSZ9 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV30A0A087WSZ9 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV30A0A087WSZ9 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV30A0A087WSZ9 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV30A0A087WSZ9 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV30A0A087WSZ9 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC17.78■□□□□ 0.44
TRAV30A0A087WSZ9 DUX4L18-201ENST00000553347 1267 ntBASIC17.78■□□□□ 0.44
TRAV30A0A087WSZ9 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC17.78■□□□□ 0.44
TRAV30A0A087WSZ9 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV30A0A087WSZ9 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV30A0A087WSZ9 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
TRAV30A0A087WSZ9 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
TRAV30A0A087WSZ9 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRAV30A0A087WSZ9 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TRAV30A0A087WSZ9 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC17.77■□□□□ 0.44
TRAV30A0A087WSZ9 EI24-213ENST00000618552 1747 ntTSL 5 BASIC17.77■□□□□ 0.44
TRAV30A0A087WSZ9 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
TRAV30A0A087WSZ9 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC17.77■□□□□ 0.43
TRAV30A0A087WSZ9 CASK-201ENST00000378154 2494 ntTSL 5 BASIC17.77■□□□□ 0.43
TRAV30A0A087WSZ9 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC17.77■□□□□ 0.43
TRAV30A0A087WSZ9 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
TRAV30A0A087WSZ9 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TRAV30A0A087WSZ9 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV30A0A087WSZ9 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV30A0A087WSZ9 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV30A0A087WSZ9 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC17.76■□□□□ 0.43
TRAV30A0A087WSZ9 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV30A0A087WSZ9 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV30A0A087WSZ9 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV30A0A087WSZ9 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV30A0A087WSZ9 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC17.76■□□□□ 0.43
TRAV30A0A087WSZ9 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV30A0A087WSZ9 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV30A0A087WSZ9 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
TRAV30A0A087WSZ9 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV30A0A087WSZ9 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV30A0A087WSZ9 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC17.75■□□□□ 0.43
TRAV30A0A087WSZ9 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV30A0A087WSZ9 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV30A0A087WSZ9 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV30A0A087WSZ9 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV30A0A087WSZ9 NFE2L3P1-201ENST00000588207 1959 ntBASIC17.75■□□□□ 0.43
TRAV30A0A087WSZ9 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV30A0A087WSZ9 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC17.75■□□□□ 0.43
TRAV30A0A087WSZ9 IDNK-201ENST00000376417 511 ntTSL 5 BASIC17.75■□□□□ 0.43
TRAV30A0A087WSZ9 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV30A0A087WSZ9 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV30A0A087WSZ9 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC17.75■□□□□ 0.43
TRAV30A0A087WSZ9 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC17.75■□□□□ 0.43
TRAV30A0A087WSZ9 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV30A0A087WSZ9 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV30A0A087WSZ9 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC17.75■□□□□ 0.43
TRAV30A0A087WSZ9 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC17.75■□□□□ 0.43
TRAV30A0A087WSZ9 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV30A0A087WSZ9 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
TRAV30A0A087WSZ9 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
TRAV30A0A087WSZ9 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC17.74■□□□□ 0.43
TRAV30A0A087WSZ9 AL024507.2-201ENST00000606070 2574 ntBASIC17.74■□□□□ 0.43
TRAV30A0A087WSZ9 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV30A0A087WSZ9 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV30A0A087WSZ9 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV30A0A087WSZ9 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV30A0A087WSZ9 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms