Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 AC068760.1-201ENST00000493579 1953 ntBASIC21.44■■□□□ 1.02
CDC42BPBQ9Y5S2 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CDC42BPBQ9Y5S2 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC21.44■■□□□ 1.02
CDC42BPBQ9Y5S2 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC21.44■■□□□ 1.02
CDC42BPBQ9Y5S2 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
CDC42BPBQ9Y5S2 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
CDC42BPBQ9Y5S2 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CDC42BPBQ9Y5S2 AC090505.1-201ENST00000430515 1834 ntBASIC21.43■■□□□ 1.02
CDC42BPBQ9Y5S2 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDC42BPBQ9Y5S2 COA6-203ENST00000366615 710 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CDC42BPBQ9Y5S2 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDC42BPBQ9Y5S2 RHOC-205ENST00000369636 786 ntTSL 2 BASIC21.43■■□□□ 1.02
CDC42BPBQ9Y5S2 PRELID3B-202ENST00000371033 943 ntTSL 2 BASIC21.43■■□□□ 1.02
CDC42BPBQ9Y5S2 PPM1N-203ENST00000396737 872 ntTSL 2 BASIC21.43■■□□□ 1.02
CDC42BPBQ9Y5S2 OR2W2P-201ENST00000406313 909 ntBASIC21.43■■□□□ 1.02
CDC42BPBQ9Y5S2 AL121983.2-202ENST00000419983 535 ntTSL 3 BASIC21.43■■□□□ 1.02
CDC42BPBQ9Y5S2 AP000244.1-201ENST00000424582 201 ntBASIC21.43■■□□□ 1.02
CDC42BPBQ9Y5S2 IFNWP2-201ENST00000431203 580 ntBASIC21.43■■□□□ 1.02
CDC42BPBQ9Y5S2 NRADDP-201ENST00000437305 691 ntBASIC21.43■■□□□ 1.02
CDC42BPBQ9Y5S2 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC21.43■■□□□ 1.02
CDC42BPBQ9Y5S2 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
CDC42BPBQ9Y5S2 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDC42BPBQ9Y5S2 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDC42BPBQ9Y5S2 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CDC42BPBQ9Y5S2 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
CDC42BPBQ9Y5S2 TBC1D27-202ENST00000424239 1573 ntBASIC21.43■■□□□ 1.02
CDC42BPBQ9Y5S2 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CDC42BPBQ9Y5S2 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDC42BPBQ9Y5S2 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDC42BPBQ9Y5S2 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CDC42BPBQ9Y5S2 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
CDC42BPBQ9Y5S2 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDC42BPBQ9Y5S2 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
CDC42BPBQ9Y5S2 RN7SL832P-201ENST00000607781 1756 ntBASIC21.43■■□□□ 1.02
CDC42BPBQ9Y5S2 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC21.43■■□□□ 1.02
CDC42BPBQ9Y5S2 AP000354.1-201ENST00000396982 456 ntBASIC21.43■■□□□ 1.02
CDC42BPBQ9Y5S2 CCDC12-202ENST00000425441 1097 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
CDC42BPBQ9Y5S2 ITGA9-AS1-205ENST00000438136 578 ntTSL 4 BASIC21.43■■□□□ 1.02
CDC42BPBQ9Y5S2 CD81-209ENST00000492627 886 ntTSL 3 BASIC21.43■■□□□ 1.02
CDC42BPBQ9Y5S2 RHOH-206ENST00000505618 1225 ntAPPRIS P1 TSL 4 BASIC21.43■■□□□ 1.02
CDC42BPBQ9Y5S2 HIST2H4A-201ENST00000578186 583 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
CDC42BPBQ9Y5S2 MIAT_exon5_3.1-201ENST00000613656 377 ntBASIC21.43■■□□□ 1.02
CDC42BPBQ9Y5S2 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDC42BPBQ9Y5S2 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDC42BPBQ9Y5S2 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDC42BPBQ9Y5S2 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC21.43■■□□□ 1.02
CDC42BPBQ9Y5S2 WARS-203ENST00000358655 2466 ntTSL 2 BASIC21.43■■□□□ 1.02
CDC42BPBQ9Y5S2 MPI-203ENST00000535694 1523 ntTSL 2 BASIC21.42■■□□□ 1.02
CDC42BPBQ9Y5S2 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CDC42BPBQ9Y5S2 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
CDC42BPBQ9Y5S2 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CDC42BPBQ9Y5S2 SSR4-202ENST00000370085 526 ntTSL 2 BASIC21.42■■□□□ 1.02
CDC42BPBQ9Y5S2 HNRNPA1P58-201ENST00000403629 610 ntBASIC21.42■■□□□ 1.02
CDC42BPBQ9Y5S2 AC092570.1-201ENST00000414446 469 ntBASIC21.42■■□□□ 1.02
CDC42BPBQ9Y5S2 GALP-202ENST00000440823 889 ntTSL 5 BASIC21.42■■□□□ 1.02
CDC42BPBQ9Y5S2 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC21.42■■□□□ 1.02
CDC42BPBQ9Y5S2 NAV1-210ENST00000593583 726 ntBASIC21.42■■□□□ 1.02
CDC42BPBQ9Y5S2 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC21.42■■□□□ 1.02
CDC42BPBQ9Y5S2 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC21.42■■□□□ 1.02
CDC42BPBQ9Y5S2 AC090510.3-201ENST00000615831 821 ntBASIC21.42■■□□□ 1.02
CDC42BPBQ9Y5S2 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC21.42■■□□□ 1.02
CDC42BPBQ9Y5S2 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
CDC42BPBQ9Y5S2 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
CDC42BPBQ9Y5S2 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CDC42BPBQ9Y5S2 ZNF691-201ENST00000372502 1910 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
CDC42BPBQ9Y5S2 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CDC42BPBQ9Y5S2 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC21.42■■□□□ 1.02
CDC42BPBQ9Y5S2 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
CDC42BPBQ9Y5S2 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CDC42BPBQ9Y5S2 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CDC42BPBQ9Y5S2 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
CDC42BPBQ9Y5S2 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC21.41■■□□□ 1.02
CDC42BPBQ9Y5S2 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CDC42BPBQ9Y5S2 WAC-202ENST00000347934 2839 ntTSL 5 BASIC21.41■■□□□ 1.02
CDC42BPBQ9Y5S2 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
CDC42BPBQ9Y5S2 MRPL35-201ENST00000254644 1061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CDC42BPBQ9Y5S2 ORMDL2-205ENST00000552672 760 ntTSL 2 BASIC21.41■■□□□ 1.02
CDC42BPBQ9Y5S2 AC148477.9-201ENST00000623974 539 ntBASIC21.41■■□□□ 1.02
CDC42BPBQ9Y5S2 CASP16P-204ENST00000635032 809 ntBASIC21.41■■□□□ 1.02
CDC42BPBQ9Y5S2 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CDC42BPBQ9Y5S2 SRP9-201ENST00000304786 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CDC42BPBQ9Y5S2 AC007952.5-201ENST00000572818 1486 ntBASIC21.41■■□□□ 1.02
CDC42BPBQ9Y5S2 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
CDC42BPBQ9Y5S2 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CDC42BPBQ9Y5S2 MARS-233ENST00000628866 2583 ntTSL 5 BASIC21.41■■□□□ 1.02
CDC42BPBQ9Y5S2 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
CDC42BPBQ9Y5S2 AL139158.3-201ENST00000641212 1562 ntBASIC21.41■■□□□ 1.02
CDC42BPBQ9Y5S2 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CDC42BPBQ9Y5S2 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC21.41■■□□□ 1.02
CDC42BPBQ9Y5S2 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CDC42BPBQ9Y5S2 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CDC42BPBQ9Y5S2 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CDC42BPBQ9Y5S2 ZNF614-202ENST00000356322 1293 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CDC42BPBQ9Y5S2 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CDC42BPBQ9Y5S2 LRRC3-AS1-201ENST00000426578 784 ntTSL 3 BASIC21.41■■□□□ 1.02
CDC42BPBQ9Y5S2 NALT1-202ENST00000450304 437 ntTSL 3 BASIC21.41■■□□□ 1.02
CDC42BPBQ9Y5S2 FOXP4-AS1-205ENST00000454812 575 ntTSL 2 BASIC21.41■■□□□ 1.02
CDC42BPBQ9Y5S2 RN7SL351P-201ENST00000469306 248 ntBASIC21.41■■□□□ 1.02
CDC42BPBQ9Y5S2 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
CDC42BPBQ9Y5S2 ANKRD26P1-203ENST00000569528 966 ntBASIC21.41■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms