Protein–RNA interactions for Protein: Q9Y5L0

TNPO3, Transportin-3, humanhuman

Known RBP Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO3Q9Y5L0 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC14.39□□□□□ -0.11
TNPO3Q9Y5L0 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TNPO3Q9Y5L0 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TNPO3Q9Y5L0 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TNPO3Q9Y5L0 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TNPO3Q9Y5L0 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
TNPO3Q9Y5L0 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC14.39□□□□□ -0.11
TNPO3Q9Y5L0 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC14.39□□□□□ -0.11
TNPO3Q9Y5L0 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC14.39□□□□□ -0.11
TNPO3Q9Y5L0 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TNPO3Q9Y5L0 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC14.39□□□□□ -0.11
TNPO3Q9Y5L0 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC14.39□□□□□ -0.11
TNPO3Q9Y5L0 AL590440.2-201ENST00000641973 1595 ntBASIC14.39□□□□□ -0.11
TNPO3Q9Y5L0 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TNPO3Q9Y5L0 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TNPO3Q9Y5L0 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TNPO3Q9Y5L0 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TNPO3Q9Y5L0 AC087386.2-201ENST00000623212 4637 ntBASIC14.38□□□□□ -0.11
TNPO3Q9Y5L0 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TNPO3Q9Y5L0 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC14.38□□□□□ -0.11
TNPO3Q9Y5L0 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
TNPO3Q9Y5L0 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TNPO3Q9Y5L0 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC14.38□□□□□ -0.11
TNPO3Q9Y5L0 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TNPO3Q9Y5L0 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TNPO3Q9Y5L0 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TNPO3Q9Y5L0 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TNPO3Q9Y5L0 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TNPO3Q9Y5L0 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TNPO3Q9Y5L0 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
TNPO3Q9Y5L0 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TNPO3Q9Y5L0 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TNPO3Q9Y5L0 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
TNPO3Q9Y5L0 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC14.38□□□□□ -0.11
TNPO3Q9Y5L0 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TNPO3Q9Y5L0 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TNPO3Q9Y5L0 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
TNPO3Q9Y5L0 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
TNPO3Q9Y5L0 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TNPO3Q9Y5L0 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
TNPO3Q9Y5L0 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
TNPO3Q9Y5L0 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TNPO3Q9Y5L0 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TNPO3Q9Y5L0 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC14.38□□□□□ -0.11
TNPO3Q9Y5L0 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC14.38□□□□□ -0.11
TNPO3Q9Y5L0 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TNPO3Q9Y5L0 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TNPO3Q9Y5L0 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC14.38□□□□□ -0.11
TNPO3Q9Y5L0 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC14.38□□□□□ -0.11
TNPO3Q9Y5L0 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
TNPO3Q9Y5L0 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC14.38□□□□□ -0.11
TNPO3Q9Y5L0 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC14.38□□□□□ -0.11
TNPO3Q9Y5L0 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TNPO3Q9Y5L0 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
TNPO3Q9Y5L0 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TNPO3Q9Y5L0 ETV2-208ENST00000621247 941 ntTSL 5 BASIC14.38□□□□□ -0.11
TNPO3Q9Y5L0 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TNPO3Q9Y5L0 AC012617.1-204ENST00000586340 2305 ntBASIC14.38□□□□□ -0.11
TNPO3Q9Y5L0 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC14.38□□□□□ -0.11
TNPO3Q9Y5L0 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC14.38□□□□□ -0.11
TNPO3Q9Y5L0 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TNPO3Q9Y5L0 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC14.38□□□□□ -0.11
TNPO3Q9Y5L0 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TNPO3Q9Y5L0 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
TNPO3Q9Y5L0 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC14.38□□□□□ -0.11
TNPO3Q9Y5L0 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
TNPO3Q9Y5L0 HPD-204ENST00000543163 1709 ntTSL 5 BASIC14.38□□□□□ -0.11
TNPO3Q9Y5L0 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TNPO3Q9Y5L0 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TNPO3Q9Y5L0 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TNPO3Q9Y5L0 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TNPO3Q9Y5L0 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
TNPO3Q9Y5L0 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
TNPO3Q9Y5L0 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
TNPO3Q9Y5L0 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
TNPO3Q9Y5L0 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
TNPO3Q9Y5L0 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC14.37□□□□□ -0.11
TNPO3Q9Y5L0 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TNPO3Q9Y5L0 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC14.37□□□□□ -0.11
TNPO3Q9Y5L0 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
TNPO3Q9Y5L0 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
TNPO3Q9Y5L0 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TNPO3Q9Y5L0 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC14.37□□□□□ -0.11
TNPO3Q9Y5L0 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
TNPO3Q9Y5L0 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
TNPO3Q9Y5L0 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TNPO3Q9Y5L0 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TNPO3Q9Y5L0 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TNPO3Q9Y5L0 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TNPO3Q9Y5L0 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC14.37□□□□□ -0.11
TNPO3Q9Y5L0 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TNPO3Q9Y5L0 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TNPO3Q9Y5L0 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TNPO3Q9Y5L0 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TNPO3Q9Y5L0 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TNPO3Q9Y5L0 AC005229.1-201ENST00000392885 409 ntBASIC14.37□□□□□ -0.11
TNPO3Q9Y5L0 RN7SKP175-201ENST00000408472 289 ntBASIC14.37□□□□□ -0.11
TNPO3Q9Y5L0 C2orf27AP3-201ENST00000434123 579 ntBASIC14.37□□□□□ -0.11
TNPO3Q9Y5L0 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TNPO3Q9Y5L0 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms