Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SSX2IPQ9Y2D8 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
SSX2IPQ9Y2D8 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SSX2IPQ9Y2D8 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
SSX2IPQ9Y2D8 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SSX2IPQ9Y2D8 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC15.87■□□□□ 0.13
SSX2IPQ9Y2D8 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SSX2IPQ9Y2D8 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC15.87■□□□□ 0.13
SSX2IPQ9Y2D8 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC15.87■□□□□ 0.13
SSX2IPQ9Y2D8 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC15.87■□□□□ 0.13
SSX2IPQ9Y2D8 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SSX2IPQ9Y2D8 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SSX2IPQ9Y2D8 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
SSX2IPQ9Y2D8 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC15.87■□□□□ 0.13
SSX2IPQ9Y2D8 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
SSX2IPQ9Y2D8 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
SSX2IPQ9Y2D8 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC15.87■□□□□ 0.13
SSX2IPQ9Y2D8 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
SSX2IPQ9Y2D8 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SSX2IPQ9Y2D8 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
SSX2IPQ9Y2D8 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
SSX2IPQ9Y2D8 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
SSX2IPQ9Y2D8 RN7SKP214-201ENST00000364208 315 ntBASIC15.87■□□□□ 0.13
SSX2IPQ9Y2D8 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
SSX2IPQ9Y2D8 AC007274.2-201ENST00000421675 662 ntBASIC15.87■□□□□ 0.13
SSX2IPQ9Y2D8 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
SSX2IPQ9Y2D8 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC15.87■□□□□ 0.13
SSX2IPQ9Y2D8 PTPA-217ENST00000434095 870 ntTSL 2 BASIC15.87■□□□□ 0.13
SSX2IPQ9Y2D8 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC15.87■□□□□ 0.13
SSX2IPQ9Y2D8 AC012618.1-201ENST00000461223 412 ntBASIC15.87■□□□□ 0.13
SSX2IPQ9Y2D8 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC15.87■□□□□ 0.13
SSX2IPQ9Y2D8 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC15.87■□□□□ 0.13
SSX2IPQ9Y2D8 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SSX2IPQ9Y2D8 AL132994.2-201ENST00000603120 687 ntBASIC15.87■□□□□ 0.13
SSX2IPQ9Y2D8 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC15.87■□□□□ 0.13
SSX2IPQ9Y2D8 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC15.87■□□□□ 0.13
SSX2IPQ9Y2D8 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
SSX2IPQ9Y2D8 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
SSX2IPQ9Y2D8 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SSX2IPQ9Y2D8 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
SSX2IPQ9Y2D8 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
SSX2IPQ9Y2D8 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SSX2IPQ9Y2D8 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SSX2IPQ9Y2D8 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SSX2IPQ9Y2D8 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC15.87■□□□□ 0.13
SSX2IPQ9Y2D8 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SSX2IPQ9Y2D8 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
SSX2IPQ9Y2D8 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SSX2IPQ9Y2D8 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15.87■□□□□ 0.13
SSX2IPQ9Y2D8 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC15.87■□□□□ 0.13
SSX2IPQ9Y2D8 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SSX2IPQ9Y2D8 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SSX2IPQ9Y2D8 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.87■□□□□ 0.13
SSX2IPQ9Y2D8 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
SSX2IPQ9Y2D8 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SSX2IPQ9Y2D8 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SSX2IPQ9Y2D8 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SSX2IPQ9Y2D8 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SSX2IPQ9Y2D8 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC15.86■□□□□ 0.13
SSX2IPQ9Y2D8 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
SSX2IPQ9Y2D8 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC15.86■□□□□ 0.13
SSX2IPQ9Y2D8 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
SSX2IPQ9Y2D8 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC15.86■□□□□ 0.13
SSX2IPQ9Y2D8 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
SSX2IPQ9Y2D8 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SSX2IPQ9Y2D8 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
SSX2IPQ9Y2D8 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SSX2IPQ9Y2D8 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC15.86■□□□□ 0.13
SSX2IPQ9Y2D8 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
SSX2IPQ9Y2D8 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
SSX2IPQ9Y2D8 PGR-210ENST00000619228 3038 ntTSL 5 BASIC15.86■□□□□ 0.13
SSX2IPQ9Y2D8 AC009090.5-201ENST00000624886 2285 ntBASIC15.86■□□□□ 0.13
SSX2IPQ9Y2D8 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
SSX2IPQ9Y2D8 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
SSX2IPQ9Y2D8 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
SSX2IPQ9Y2D8 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SSX2IPQ9Y2D8 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SSX2IPQ9Y2D8 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC15.86■□□□□ 0.13
SSX2IPQ9Y2D8 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SSX2IPQ9Y2D8 FTLP1-201ENST00000449155 526 ntBASIC15.86■□□□□ 0.13
SSX2IPQ9Y2D8 RPL18P13-201ENST00000478088 569 ntBASIC15.86■□□□□ 0.13
SSX2IPQ9Y2D8 NUP210P1-202ENST00000504322 710 ntBASIC15.86■□□□□ 0.13
SSX2IPQ9Y2D8 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC15.86■□□□□ 0.13
SSX2IPQ9Y2D8 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC15.86■□□□□ 0.13
SSX2IPQ9Y2D8 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC15.86■□□□□ 0.13
SSX2IPQ9Y2D8 FGFR3P5-201ENST00000564496 886 ntBASIC15.86■□□□□ 0.13
SSX2IPQ9Y2D8 SNORD3B-2-202ENST00000571722 791 ntBASIC15.86■□□□□ 0.13
SSX2IPQ9Y2D8 MIR3907-201ENST00000579424 151 ntBASIC15.86■□□□□ 0.13
SSX2IPQ9Y2D8 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SSX2IPQ9Y2D8 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
SSX2IPQ9Y2D8 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SSX2IPQ9Y2D8 AC132192.2-201ENST00000596206 1147 ntBASIC15.86■□□□□ 0.13
SSX2IPQ9Y2D8 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
SSX2IPQ9Y2D8 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC15.86■□□□□ 0.13
SSX2IPQ9Y2D8 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC15.86■□□□□ 0.13
SSX2IPQ9Y2D8 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
SSX2IPQ9Y2D8 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC15.86■□□□□ 0.13
SSX2IPQ9Y2D8 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
SSX2IPQ9Y2D8 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.86■□□□□ 0.13
SSX2IPQ9Y2D8 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms