Protein–RNA interactions for Protein: Q9UNL2

SSR3, Translocon-associated protein subunit gamma, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3Q9UNL2 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SSR3Q9UNL2 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
SSR3Q9UNL2 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
SSR3Q9UNL2 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SSR3Q9UNL2 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
SSR3Q9UNL2 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
SSR3Q9UNL2 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC13.19□□□□□ -0.3
SSR3Q9UNL2 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC13.19□□□□□ -0.3
SSR3Q9UNL2 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC13.19□□□□□ -0.3
SSR3Q9UNL2 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SSR3Q9UNL2 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC13.19□□□□□ -0.3
SSR3Q9UNL2 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC13.19□□□□□ -0.3
SSR3Q9UNL2 KRT8P35-201ENST00000483942 1338 ntBASIC13.19□□□□□ -0.3
SSR3Q9UNL2 SCN2B-201ENST00000278947 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SSR3Q9UNL2 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SSR3Q9UNL2 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SSR3Q9UNL2 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
SSR3Q9UNL2 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
SSR3Q9UNL2 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC13.19□□□□□ -0.3
SSR3Q9UNL2 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
SSR3Q9UNL2 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SSR3Q9UNL2 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
SSR3Q9UNL2 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
SSR3Q9UNL2 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
SSR3Q9UNL2 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SSR3Q9UNL2 ADH5P3-201ENST00000433842 1137 ntBASIC13.19□□□□□ -0.3
SSR3Q9UNL2 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC13.19□□□□□ -0.3
SSR3Q9UNL2 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC13.19□□□□□ -0.3
SSR3Q9UNL2 GATB-205ENST00000508611 605 ntTSL 2 BASIC13.19□□□□□ -0.3
SSR3Q9UNL2 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC13.19□□□□□ -0.3
SSR3Q9UNL2 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
SSR3Q9UNL2 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SSR3Q9UNL2 RPS15-202ENST00000585665 467 ntTSL 3 BASIC13.19□□□□□ -0.3
SSR3Q9UNL2 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC13.19□□□□□ -0.3
SSR3Q9UNL2 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
SSR3Q9UNL2 RN7SL828P-201ENST00000607615 303 ntBASIC13.19□□□□□ -0.3
SSR3Q9UNL2 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC13.19□□□□□ -0.3
SSR3Q9UNL2 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC13.19□□□□□ -0.3
SSR3Q9UNL2 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
SSR3Q9UNL2 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SSR3Q9UNL2 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC13.19□□□□□ -0.3
SSR3Q9UNL2 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SSR3Q9UNL2 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SSR3Q9UNL2 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
SSR3Q9UNL2 AC118758.2-201ENST00000614242 2813 ntBASIC13.19□□□□□ -0.3
SSR3Q9UNL2 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SSR3Q9UNL2 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC13.19□□□□□ -0.3
SSR3Q9UNL2 AL157996.1-201ENST00000624684 2299 ntBASIC13.19□□□□□ -0.3
SSR3Q9UNL2 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
SSR3Q9UNL2 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SSR3Q9UNL2 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
SSR3Q9UNL2 C2-206ENST00000442278 2434 ntTSL 2 BASIC13.19□□□□□ -0.3
SSR3Q9UNL2 HPD-204ENST00000543163 1709 ntTSL 5 BASIC13.19□□□□□ -0.3
SSR3Q9UNL2 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
SSR3Q9UNL2 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
SSR3Q9UNL2 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC13.18□□□□□ -0.3
SSR3Q9UNL2 AC011498.7-201ENST00000624986 2027 ntBASIC13.18□□□□□ -0.3
SSR3Q9UNL2 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC13.18□□□□□ -0.3
SSR3Q9UNL2 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SSR3Q9UNL2 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SSR3Q9UNL2 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SSR3Q9UNL2 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC13.18□□□□□ -0.3
SSR3Q9UNL2 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SSR3Q9UNL2 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
SSR3Q9UNL2 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SSR3Q9UNL2 NME1-209ENST00000511355 1645 ntTSL 5 BASIC13.18□□□□□ -0.3
SSR3Q9UNL2 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC13.18□□□□□ -0.3
SSR3Q9UNL2 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC13.18□□□□□ -0.3
SSR3Q9UNL2 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC13.18□□□□□ -0.3
SSR3Q9UNL2 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SSR3Q9UNL2 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SSR3Q9UNL2 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SSR3Q9UNL2 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SSR3Q9UNL2 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SSR3Q9UNL2 HNRNPA1P28-201ENST00000424481 961 ntBASIC13.18□□□□□ -0.3
SSR3Q9UNL2 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC13.18□□□□□ -0.3
SSR3Q9UNL2 FAM58CP-201ENST00000435741 640 ntBASIC13.18□□□□□ -0.3
SSR3Q9UNL2 RPL13P2-201ENST00000440687 659 ntBASIC13.18□□□□□ -0.3
SSR3Q9UNL2 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC13.18□□□□□ -0.3
SSR3Q9UNL2 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC13.18□□□□□ -0.3
SSR3Q9UNL2 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC13.18□□□□□ -0.3
SSR3Q9UNL2 AC026150.2-201ENST00000564693 1156 ntBASIC13.18□□□□□ -0.3
SSR3Q9UNL2 AP001005.1-201ENST00000571755 1248 ntBASIC13.18□□□□□ -0.3
SSR3Q9UNL2 AC092364.2-202ENST00000597012 1073 ntBASIC13.18□□□□□ -0.3
SSR3Q9UNL2 AL133215.2-201ENST00000609242 977 ntBASIC13.18□□□□□ -0.3
SSR3Q9UNL2 AC003101.2-201ENST00000612557 442 ntBASIC13.18□□□□□ -0.3
SSR3Q9UNL2 LINC00628-201ENST00000628516 1289 ntBASIC13.18□□□□□ -0.3
SSR3Q9UNL2 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SSR3Q9UNL2 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC13.18□□□□□ -0.3
SSR3Q9UNL2 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SSR3Q9UNL2 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SSR3Q9UNL2 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SSR3Q9UNL2 YLPM1-207ENST00000552421 4899 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
SSR3Q9UNL2 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC13.18□□□□□ -0.3
SSR3Q9UNL2 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
SSR3Q9UNL2 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
SSR3Q9UNL2 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SSR3Q9UNL2 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SSR3Q9UNL2 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SSR3Q9UNL2 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms