Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
SYNPO2Q9UMS6 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
SYNPO2Q9UMS6 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
SYNPO2Q9UMS6 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC16.72■□□□□ 0.27
SYNPO2Q9UMS6 ELP5-212ENST00000574255 671 ntTSL 2 BASIC16.72■□□□□ 0.27
SYNPO2Q9UMS6 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SYNPO2Q9UMS6 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SYNPO2Q9UMS6 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
SYNPO2Q9UMS6 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SYNPO2Q9UMS6 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC16.72■□□□□ 0.27
SYNPO2Q9UMS6 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
SYNPO2Q9UMS6 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SYNPO2Q9UMS6 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SYNPO2Q9UMS6 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SYNPO2Q9UMS6 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
SYNPO2Q9UMS6 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SYNPO2Q9UMS6 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SYNPO2Q9UMS6 AC074138.1-201ENST00000611182 1303 ntBASIC16.71■□□□□ 0.27
SYNPO2Q9UMS6 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
SYNPO2Q9UMS6 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
SYNPO2Q9UMS6 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SYNPO2Q9UMS6 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
SYNPO2Q9UMS6 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SYNPO2Q9UMS6 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
SYNPO2Q9UMS6 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SYNPO2Q9UMS6 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SYNPO2Q9UMS6 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SYNPO2Q9UMS6 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC16.71■□□□□ 0.27
SYNPO2Q9UMS6 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
SYNPO2Q9UMS6 FXNP2-201ENST00000411625 547 ntBASIC16.71■□□□□ 0.27
SYNPO2Q9UMS6 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC16.71■□□□□ 0.27
SYNPO2Q9UMS6 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SYNPO2Q9UMS6 AC098935.1-201ENST00000446057 611 ntBASIC16.71■□□□□ 0.27
SYNPO2Q9UMS6 FGFR3P1-201ENST00000449999 601 ntBASIC16.71■□□□□ 0.27
SYNPO2Q9UMS6 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC16.71■□□□□ 0.27
SYNPO2Q9UMS6 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC16.71■□□□□ 0.27
SYNPO2Q9UMS6 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC16.71■□□□□ 0.27
SYNPO2Q9UMS6 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC16.71■□□□□ 0.27
SYNPO2Q9UMS6 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SYNPO2Q9UMS6 SPCS2P2-201ENST00000603270 608 ntBASIC16.71■□□□□ 0.27
SYNPO2Q9UMS6 AC007718.1-201ENST00000621078 280 ntBASIC16.71■□□□□ 0.27
SYNPO2Q9UMS6 CMC2-224ENST00000630396 481 ntTSL 5 BASIC16.71■□□□□ 0.27
SYNPO2Q9UMS6 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SYNPO2Q9UMS6 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC16.71■□□□□ 0.27
SYNPO2Q9UMS6 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC16.71■□□□□ 0.27
SYNPO2Q9UMS6 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SYNPO2Q9UMS6 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
SYNPO2Q9UMS6 AC007952.5-201ENST00000572818 1486 ntBASIC16.71■□□□□ 0.27
SYNPO2Q9UMS6 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SYNPO2Q9UMS6 RN7SL832P-201ENST00000607781 1756 ntBASIC16.71■□□□□ 0.27
SYNPO2Q9UMS6 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
SYNPO2Q9UMS6 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SYNPO2Q9UMS6 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SYNPO2Q9UMS6 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SYNPO2Q9UMS6 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SYNPO2Q9UMS6 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
SYNPO2Q9UMS6 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC16.7■□□□□ 0.26
SYNPO2Q9UMS6 HPD-204ENST00000543163 1709 ntTSL 5 BASIC16.7■□□□□ 0.26
SYNPO2Q9UMS6 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SYNPO2Q9UMS6 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SYNPO2Q9UMS6 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.7■□□□□ 0.26
SYNPO2Q9UMS6 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SYNPO2Q9UMS6 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC16.7■□□□□ 0.26
SYNPO2Q9UMS6 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SYNPO2Q9UMS6 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC16.7■□□□□ 0.26
SYNPO2Q9UMS6 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SYNPO2Q9UMS6 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SYNPO2Q9UMS6 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SYNPO2Q9UMS6 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SYNPO2Q9UMS6 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
SYNPO2Q9UMS6 OR8T1P-201ENST00000421347 918 ntBASIC16.7■□□□□ 0.26
SYNPO2Q9UMS6 PPP1R2P4-201ENST00000424051 595 ntBASIC16.7■□□□□ 0.26
SYNPO2Q9UMS6 KRT18P15-201ENST00000458108 1291 ntBASIC16.7■□□□□ 0.26
SYNPO2Q9UMS6 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC16.7■□□□□ 0.26
SYNPO2Q9UMS6 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC16.7■□□□□ 0.26
SYNPO2Q9UMS6 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC16.7■□□□□ 0.26
SYNPO2Q9UMS6 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC16.7■□□□□ 0.26
SYNPO2Q9UMS6 DNM1P30-201ENST00000563586 452 ntBASIC16.7■□□□□ 0.26
SYNPO2Q9UMS6 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC16.7■□□□□ 0.26
SYNPO2Q9UMS6 COX6A1P2-201ENST00000620597 330 ntBASIC16.7■□□□□ 0.26
SYNPO2Q9UMS6 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SYNPO2Q9UMS6 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
SYNPO2Q9UMS6 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
SYNPO2Q9UMS6 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.7■□□□□ 0.26
SYNPO2Q9UMS6 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC16.7■□□□□ 0.26
SYNPO2Q9UMS6 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
SYNPO2Q9UMS6 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SYNPO2Q9UMS6 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SYNPO2Q9UMS6 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SYNPO2Q9UMS6 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC16.7■□□□□ 0.26
SYNPO2Q9UMS6 AC015802.1-201ENST00000588104 1449 ntBASIC16.7■□□□□ 0.26
SYNPO2Q9UMS6 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC16.7■□□□□ 0.26
SYNPO2Q9UMS6 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC16.7■□□□□ 0.26
SYNPO2Q9UMS6 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.7■□□□□ 0.26
SYNPO2Q9UMS6 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
SYNPO2Q9UMS6 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
SYNPO2Q9UMS6 RPL13AP3-202ENST00000494676 1473 ntBASIC16.69■□□□□ 0.26
SYNPO2Q9UMS6 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SYNPO2Q9UMS6 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
SYNPO2Q9UMS6 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms