Protein–RNA interactions for Protein: Q9UBX2

DUX4, Double homeobox protein 4, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4Q9UBX2 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC13.09□□□□□ -0.31
DUX4Q9UBX2 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC13.09□□□□□ -0.31
DUX4Q9UBX2 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC13.09□□□□□ -0.31
DUX4Q9UBX2 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC13.09□□□□□ -0.31
DUX4Q9UBX2 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC13.09□□□□□ -0.31
DUX4Q9UBX2 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC13.09□□□□□ -0.31
DUX4Q9UBX2 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC13.09□□□□□ -0.31
DUX4Q9UBX2 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC13.09□□□□□ -0.31
DUX4Q9UBX2 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC13.09□□□□□ -0.31
DUX4Q9UBX2 AL158212.4-201ENST00000624062 1286 ntBASIC13.09□□□□□ -0.31
DUX4Q9UBX2 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC13.09□□□□□ -0.31
DUX4Q9UBX2 MRVI1-201ENST00000423302 6126 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
DUX4Q9UBX2 BRD1-201ENST00000216267 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
DUX4Q9UBX2 PLEC-208ENST00000436759 14787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
DUX4Q9UBX2 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC13.09□□□□□ -0.31
DUX4Q9UBX2 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
DUX4Q9UBX2 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
DUX4Q9UBX2 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
DUX4Q9UBX2 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
DUX4Q9UBX2 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
DUX4Q9UBX2 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
DUX4Q9UBX2 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
DUX4Q9UBX2 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
DUX4Q9UBX2 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
DUX4Q9UBX2 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC13.09□□□□□ -0.31
DUX4Q9UBX2 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC13.09□□□□□ -0.31
DUX4Q9UBX2 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC13.09□□□□□ -0.31
DUX4Q9UBX2 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
DUX4Q9UBX2 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
DUX4Q9UBX2 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC13.09□□□□□ -0.31
DUX4Q9UBX2 AC010336.1-201ENST00000539278 4739 ntBASIC13.08□□□□□ -0.31
DUX4Q9UBX2 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
DUX4Q9UBX2 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
DUX4Q9UBX2 ERBB2-202ENST00000406381 4564 ntTSL 5 BASIC13.08□□□□□ -0.31
DUX4Q9UBX2 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.31
DUX4Q9UBX2 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
DUX4Q9UBX2 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
DUX4Q9UBX2 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
DUX4Q9UBX2 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC13.08□□□□□ -0.32
DUX4Q9UBX2 PPT1-213ENST00000641319 2388 ntBASIC13.08□□□□□ -0.32
DUX4Q9UBX2 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC13.08□□□□□ -0.32
DUX4Q9UBX2 CACNA1C-219ENST00000399649 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
DUX4Q9UBX2 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
DUX4Q9UBX2 SLIT2-204ENST00000504154 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
DUX4Q9UBX2 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
DUX4Q9UBX2 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
DUX4Q9UBX2 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
DUX4Q9UBX2 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC13.08□□□□□ -0.32
DUX4Q9UBX2 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC13.08□□□□□ -0.32
DUX4Q9UBX2 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
DUX4Q9UBX2 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
DUX4Q9UBX2 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
DUX4Q9UBX2 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
DUX4Q9UBX2 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
DUX4Q9UBX2 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
DUX4Q9UBX2 GOLGA6L11P-201ENST00000417252 1298 ntBASIC13.08□□□□□ -0.32
DUX4Q9UBX2 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC13.08□□□□□ -0.32
DUX4Q9UBX2 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC13.08□□□□□ -0.32
DUX4Q9UBX2 OARD1-208ENST00000469104 704 ntTSL 2 BASIC13.08□□□□□ -0.32
DUX4Q9UBX2 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
DUX4Q9UBX2 TIMM17BP1-201ENST00000545713 516 ntBASIC13.08□□□□□ -0.32
DUX4Q9UBX2 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC13.08□□□□□ -0.32
DUX4Q9UBX2 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC13.08□□□□□ -0.32
DUX4Q9UBX2 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC13.08□□□□□ -0.32
DUX4Q9UBX2 CMC2-214ENST00000565925 640 ntTSL 5 BASIC13.08□□□□□ -0.32
DUX4Q9UBX2 NFAT5-209ENST00000567239 6376 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
DUX4Q9UBX2 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC13.08□□□□□ -0.32
DUX4Q9UBX2 AC092364.2-202ENST00000597012 1073 ntBASIC13.08□□□□□ -0.32
DUX4Q9UBX2 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC13.08□□□□□ -0.32
DUX4Q9UBX2 YTHDF3-AS1-201ENST00000603538 718 ntBASIC13.08□□□□□ -0.32
DUX4Q9UBX2 AC009118.2-201ENST00000613275 655 ntBASIC13.08□□□□□ -0.32
DUX4Q9UBX2 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC13.08□□□□□ -0.32
DUX4Q9UBX2 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
DUX4Q9UBX2 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
DUX4Q9UBX2 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
DUX4Q9UBX2 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC13.08□□□□□ -0.32
DUX4Q9UBX2 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC13.08□□□□□ -0.32
DUX4Q9UBX2 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
DUX4Q9UBX2 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
DUX4Q9UBX2 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC13.08□□□□□ -0.32
DUX4Q9UBX2 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
DUX4Q9UBX2 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
DUX4Q9UBX2 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC13.08□□□□□ -0.32
DUX4Q9UBX2 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC13.08□□□□□ -0.32
DUX4Q9UBX2 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
DUX4Q9UBX2 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC13.08□□□□□ -0.32
DUX4Q9UBX2 ADNP-203ENST00000396029 6261 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
DUX4Q9UBX2 DHX34-201ENST00000328771 4372 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
DUX4Q9UBX2 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
DUX4Q9UBX2 CXCR5-201ENST00000292174 4431 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
DUX4Q9UBX2 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
DUX4Q9UBX2 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
DUX4Q9UBX2 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
DUX4Q9UBX2 CACNA1G-218ENST00000507510 7014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
DUX4Q9UBX2 LRPPRC-201ENST00000260665 6335 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
DUX4Q9UBX2 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
DUX4Q9UBX2 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
DUX4Q9UBX2 ZBED1P1-201ENST00000502364 1930 ntBASIC13.07□□□□□ -0.32
DUX4Q9UBX2 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
DUX4Q9UBX2 OR1I1-202ENST00000641398 5984 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms