Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
LINC00474Q9P2X8 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
LINC00474Q9P2X8 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
LINC00474Q9P2X8 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
LINC00474Q9P2X8 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
LINC00474Q9P2X8 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
LINC00474Q9P2X8 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
LINC00474Q9P2X8 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
LINC00474Q9P2X8 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
LINC00474Q9P2X8 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
LINC00474Q9P2X8 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC9.72□□□□□ -0.85
LINC00474Q9P2X8 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC9.72□□□□□ -0.85
LINC00474Q9P2X8 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC9.72□□□□□ -0.85
LINC00474Q9P2X8 BOLA2P3-201ENST00000404566 256 ntBASIC9.72□□□□□ -0.85
LINC00474Q9P2X8 AC098850.1-201ENST00000419919 790 ntBASIC9.72□□□□□ -0.85
LINC00474Q9P2X8 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
LINC00474Q9P2X8 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
LINC00474Q9P2X8 AC012441.1-201ENST00000446669 685 ntBASIC9.72□□□□□ -0.85
LINC00474Q9P2X8 LHX6-205ENST00000464484 666 ntTSL 2 BASIC9.72□□□□□ -0.85
LINC00474Q9P2X8 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
LINC00474Q9P2X8 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC9.72□□□□□ -0.85
LINC00474Q9P2X8 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
LINC00474Q9P2X8 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC9.72□□□□□ -0.85
LINC00474Q9P2X8 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
LINC00474Q9P2X8 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC9.72□□□□□ -0.85
LINC00474Q9P2X8 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
LINC00474Q9P2X8 LINC00552-201ENST00000625151 2579 ntBASIC9.72□□□□□ -0.85
LINC00474Q9P2X8 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
LINC00474Q9P2X8 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
LINC00474Q9P2X8 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC9.72□□□□□ -0.85
LINC00474Q9P2X8 AC134312.5-201ENST00000568031 1313 ntBASIC9.72□□□□□ -0.85
LINC00474Q9P2X8 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC9.72□□□□□ -0.85
LINC00474Q9P2X8 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC9.72□□□□□ -0.85
LINC00474Q9P2X8 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC9.72□□□□□ -0.85
LINC00474Q9P2X8 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC9.72□□□□□ -0.85
LINC00474Q9P2X8 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
LINC00474Q9P2X8 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC9.72□□□□□ -0.85
LINC00474Q9P2X8 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC9.72□□□□□ -0.85
LINC00474Q9P2X8 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC9.72□□□□□ -0.85
LINC00474Q9P2X8 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC9.72□□□□□ -0.85
LINC00474Q9P2X8 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC9.72□□□□□ -0.85
LINC00474Q9P2X8 AC006504.5-208ENST00000588784 2401 ntBASIC9.72□□□□□ -0.85
LINC00474Q9P2X8 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
LINC00474Q9P2X8 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC9.72□□□□□ -0.85
LINC00474Q9P2X8 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC9.72□□□□□ -0.85
LINC00474Q9P2X8 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
LINC00474Q9P2X8 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
LINC00474Q9P2X8 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC9.71□□□□□ -0.85
LINC00474Q9P2X8 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
LINC00474Q9P2X8 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
LINC00474Q9P2X8 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC9.71□□□□□ -0.85
LINC00474Q9P2X8 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
LINC00474Q9P2X8 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC9.71□□□□□ -0.85
LINC00474Q9P2X8 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
LINC00474Q9P2X8 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
LINC00474Q9P2X8 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
LINC00474Q9P2X8 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.85
LINC00474Q9P2X8 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
LINC00474Q9P2X8 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
LINC00474Q9P2X8 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC9.71□□□□□ -0.85
LINC00474Q9P2X8 INVS-201ENST00000262456 2968 ntTSL 5 BASIC9.71□□□□□ -0.85
LINC00474Q9P2X8 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.85
LINC00474Q9P2X8 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
LINC00474Q9P2X8 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC9.71□□□□□ -0.85
LINC00474Q9P2X8 AC005912.2-201ENST00000619492 2400 ntBASIC9.71□□□□□ -0.85
LINC00474Q9P2X8 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.85
LINC00474Q9P2X8 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC9.71□□□□□ -0.85
LINC00474Q9P2X8 NRXN1-259ENST00000637511 3651 ntTSL 5 BASIC9.71□□□□□ -0.85
LINC00474Q9P2X8 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
LINC00474Q9P2X8 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC9.71□□□□□ -0.85
LINC00474Q9P2X8 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.85
LINC00474Q9P2X8 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
LINC00474Q9P2X8 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
LINC00474Q9P2X8 MGST3-203ENST00000367885 680 ntTSL 2 BASIC9.71□□□□□ -0.86
LINC00474Q9P2X8 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC9.71□□□□□ -0.86
LINC00474Q9P2X8 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
LINC00474Q9P2X8 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
LINC00474Q9P2X8 GRAP-202ENST00000395635 834 ntTSL 2 BASIC9.71□□□□□ -0.86
LINC00474Q9P2X8 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC9.71□□□□□ -0.86
LINC00474Q9P2X8 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC9.71□□□□□ -0.86
LINC00474Q9P2X8 LSM5-207ENST00000410044 687 ntTSL 3 BASIC9.71□□□□□ -0.86
LINC00474Q9P2X8 TLE1P1-201ENST00000422965 589 ntBASIC9.71□□□□□ -0.86
LINC00474Q9P2X8 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC9.71□□□□□ -0.86
LINC00474Q9P2X8 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC9.71□□□□□ -0.86
LINC00474Q9P2X8 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC9.71□□□□□ -0.86
LINC00474Q9P2X8 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC9.71□□□□□ -0.86
LINC00474Q9P2X8 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC9.71□□□□□ -0.86
LINC00474Q9P2X8 TTTY23B-201ENST00000442790 549 ntBASIC9.71□□□□□ -0.86
LINC00474Q9P2X8 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC9.71□□□□□ -0.86
LINC00474Q9P2X8 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC9.71□□□□□ -0.86
LINC00474Q9P2X8 AC068587.3-201ENST00000526613 355 ntBASIC9.71□□□□□ -0.86
LINC00474Q9P2X8 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC9.71□□□□□ -0.86
LINC00474Q9P2X8 AC005225.4-201ENST00000557330 545 ntBASIC9.71□□□□□ -0.86
LINC00474Q9P2X8 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
LINC00474Q9P2X8 RN7SL48P-201ENST00000579283 293 ntBASIC9.71□□□□□ -0.86
LINC00474Q9P2X8 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
LINC00474Q9P2X8 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC9.71□□□□□ -0.86
LINC00474Q9P2X8 AC010319.3-201ENST00000597028 470 ntBASIC9.71□□□□□ -0.86
LINC00474Q9P2X8 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC9.71□□□□□ -0.86
LINC00474Q9P2X8 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC9.71□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms