Protein–RNA interactions for Protein: Q9P2K6

KLHL42, Kelch-like protein 42, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL42Q9P2K6 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
KLHL42Q9P2K6 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
KLHL42Q9P2K6 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
KLHL42Q9P2K6 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.11
KLHL42Q9P2K6 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
KLHL42Q9P2K6 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
KLHL42Q9P2K6 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
KLHL42Q9P2K6 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
KLHL42Q9P2K6 KCNIP3-201ENST00000295225 2940 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
KLHL42Q9P2K6 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC14.33□□□□□ -0.12
KLHL42Q9P2K6 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
KLHL42Q9P2K6 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
KLHL42Q9P2K6 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
KLHL42Q9P2K6 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
KLHL42Q9P2K6 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
KLHL42Q9P2K6 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
KLHL42Q9P2K6 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
KLHL42Q9P2K6 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
KLHL42Q9P2K6 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
KLHL42Q9P2K6 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
KLHL42Q9P2K6 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
KLHL42Q9P2K6 AC015818.8-201ENST00000587907 1519 ntBASIC14.33□□□□□ -0.12
KLHL42Q9P2K6 REXO1L6P-201ENST00000603433 1515 ntBASIC14.33□□□□□ -0.12
KLHL42Q9P2K6 TMBIM7P-202ENST00000641474 1516 ntBASIC14.33□□□□□ -0.12
KLHL42Q9P2K6 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
KLHL42Q9P2K6 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
KLHL42Q9P2K6 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
KLHL42Q9P2K6 PGF-202ENST00000405431 666 ntTSL 5 BASIC14.33□□□□□ -0.12
KLHL42Q9P2K6 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC14.33□□□□□ -0.12
KLHL42Q9P2K6 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
KLHL42Q9P2K6 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC14.33□□□□□ -0.12
KLHL42Q9P2K6 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC14.33□□□□□ -0.12
KLHL42Q9P2K6 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC14.33□□□□□ -0.12
KLHL42Q9P2K6 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC14.33□□□□□ -0.12
KLHL42Q9P2K6 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC14.33□□□□□ -0.12
KLHL42Q9P2K6 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC14.33□□□□□ -0.12
KLHL42Q9P2K6 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
KLHL42Q9P2K6 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC14.33□□□□□ -0.12
KLHL42Q9P2K6 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC14.33□□□□□ -0.12
KLHL42Q9P2K6 MIR6805-201ENST00000615055 62 ntBASIC14.33□□□□□ -0.12
KLHL42Q9P2K6 AL162426.1-201ENST00000624141 743 ntBASIC14.33□□□□□ -0.12
KLHL42Q9P2K6 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC14.33□□□□□ -0.12
KLHL42Q9P2K6 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.33□□□□□ -0.12
KLHL42Q9P2K6 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
KLHL42Q9P2K6 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
KLHL42Q9P2K6 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
KLHL42Q9P2K6 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.33□□□□□ -0.12
KLHL42Q9P2K6 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
KLHL42Q9P2K6 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.33□□□□□ -0.12
KLHL42Q9P2K6 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
KLHL42Q9P2K6 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
KLHL42Q9P2K6 TUBB8P4-201ENST00000511806 1324 ntBASIC14.33□□□□□ -0.12
KLHL42Q9P2K6 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
KLHL42Q9P2K6 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
KLHL42Q9P2K6 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC14.33□□□□□ -0.12
KLHL42Q9P2K6 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.12
KLHL42Q9P2K6 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
KLHL42Q9P2K6 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.33□□□□□ -0.12
KLHL42Q9P2K6 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.33□□□□□ -0.12
KLHL42Q9P2K6 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
KLHL42Q9P2K6 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
KLHL42Q9P2K6 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
KLHL42Q9P2K6 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
KLHL42Q9P2K6 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
KLHL42Q9P2K6 AL359881.3-201ENST00000602640 1721 ntBASIC14.32□□□□□ -0.12
KLHL42Q9P2K6 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC14.32□□□□□ -0.12
KLHL42Q9P2K6 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
KLHL42Q9P2K6 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.32□□□□□ -0.12
KLHL42Q9P2K6 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
KLHL42Q9P2K6 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC14.32□□□□□ -0.12
KLHL42Q9P2K6 SLC14A1-205ENST00000502059 2371 ntTSL 2 BASIC14.32□□□□□ -0.12
KLHL42Q9P2K6 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
KLHL42Q9P2K6 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
KLHL42Q9P2K6 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
KLHL42Q9P2K6 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
KLHL42Q9P2K6 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
KLHL42Q9P2K6 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
KLHL42Q9P2K6 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
KLHL42Q9P2K6 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
KLHL42Q9P2K6 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
KLHL42Q9P2K6 TISP43-201ENST00000409793 538 ntTSL 4 BASIC14.32□□□□□ -0.12
KLHL42Q9P2K6 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
KLHL42Q9P2K6 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
KLHL42Q9P2K6 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
KLHL42Q9P2K6 KRT223P-202ENST00000449164 1292 ntBASIC14.32□□□□□ -0.12
KLHL42Q9P2K6 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC14.32□□□□□ -0.12
KLHL42Q9P2K6 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC14.32□□□□□ -0.12
KLHL42Q9P2K6 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC14.32□□□□□ -0.12
KLHL42Q9P2K6 AC119751.2-201ENST00000504529 210 ntBASIC14.32□□□□□ -0.12
KLHL42Q9P2K6 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC14.32□□□□□ -0.12
KLHL42Q9P2K6 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
KLHL42Q9P2K6 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC14.32□□□□□ -0.12
KLHL42Q9P2K6 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC14.32□□□□□ -0.12
KLHL42Q9P2K6 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
KLHL42Q9P2K6 MIR4783-201ENST00000580343 82 ntBASIC14.32□□□□□ -0.12
KLHL42Q9P2K6 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC14.32□□□□□ -0.12
KLHL42Q9P2K6 KLK3-207ENST00000595952 969 ntTSL 3 BASIC14.32□□□□□ -0.12
KLHL42Q9P2K6 AC017083.2-201ENST00000608069 979 ntBASIC14.32□□□□□ -0.12
KLHL42Q9P2K6 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
KLHL42Q9P2K6 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms