Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
EFCC1Q9HA90 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC17.17■□□□□ 0.34
EFCC1Q9HA90 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
EFCC1Q9HA90 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
EFCC1Q9HA90 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
EFCC1Q9HA90 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
EFCC1Q9HA90 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
EFCC1Q9HA90 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
EFCC1Q9HA90 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC17.16■□□□□ 0.34
EFCC1Q9HA90 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
EFCC1Q9HA90 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC17.16■□□□□ 0.34
EFCC1Q9HA90 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
EFCC1Q9HA90 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC17.16■□□□□ 0.34
EFCC1Q9HA90 REXO1L4P-201ENST00000605109 1937 ntBASIC17.16■□□□□ 0.34
EFCC1Q9HA90 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC17.16■□□□□ 0.34
EFCC1Q9HA90 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC17.16■□□□□ 0.34
EFCC1Q9HA90 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC17.16■□□□□ 0.34
EFCC1Q9HA90 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
EFCC1Q9HA90 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
EFCC1Q9HA90 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
EFCC1Q9HA90 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
EFCC1Q9HA90 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
EFCC1Q9HA90 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
EFCC1Q9HA90 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
EFCC1Q9HA90 RN7SKP230-201ENST00000365642 335 ntBASIC17.16■□□□□ 0.34
EFCC1Q9HA90 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
EFCC1Q9HA90 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
EFCC1Q9HA90 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
EFCC1Q9HA90 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC17.16■□□□□ 0.34
EFCC1Q9HA90 AL096772.1-201ENST00000451135 781 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
EFCC1Q9HA90 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC17.16■□□□□ 0.34
EFCC1Q9HA90 AP003398.1-201ENST00000531124 318 ntBASIC17.16■□□□□ 0.34
EFCC1Q9HA90 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
EFCC1Q9HA90 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
EFCC1Q9HA90 MIR3677-201ENST00000578964 60 ntBASIC17.16■□□□□ 0.34
EFCC1Q9HA90 NAT9-220ENST00000582870 896 ntTSL 5 BASIC17.16■□□□□ 0.34
EFCC1Q9HA90 RPL17P45-201ENST00000586289 509 ntBASIC17.16■□□□□ 0.34
EFCC1Q9HA90 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC17.16■□□□□ 0.34
EFCC1Q9HA90 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC17.16■□□□□ 0.34
EFCC1Q9HA90 FO393412.1-201ENST00000619841 382 ntBASIC17.16■□□□□ 0.34
EFCC1Q9HA90 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC17.16■□□□□ 0.34
EFCC1Q9HA90 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
EFCC1Q9HA90 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
EFCC1Q9HA90 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
EFCC1Q9HA90 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
EFCC1Q9HA90 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
EFCC1Q9HA90 KRT8P21-201ENST00000430398 1491 ntBASIC17.16■□□□□ 0.34
EFCC1Q9HA90 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC17.16■□□□□ 0.34
EFCC1Q9HA90 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
EFCC1Q9HA90 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
EFCC1Q9HA90 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
EFCC1Q9HA90 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
EFCC1Q9HA90 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
EFCC1Q9HA90 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
EFCC1Q9HA90 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC17.16■□□□□ 0.34
EFCC1Q9HA90 AC105250.1-201ENST00000509378 2057 ntBASIC17.16■□□□□ 0.34
EFCC1Q9HA90 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
EFCC1Q9HA90 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
EFCC1Q9HA90 AMT-239ENST00000636865 1914 ntTSL 5 BASIC17.15■□□□□ 0.34
EFCC1Q9HA90 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
EFCC1Q9HA90 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
EFCC1Q9HA90 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
EFCC1Q9HA90 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC17.15■□□□□ 0.34
EFCC1Q9HA90 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC17.15■□□□□ 0.34
EFCC1Q9HA90 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
EFCC1Q9HA90 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
EFCC1Q9HA90 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
EFCC1Q9HA90 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC17.15■□□□□ 0.34
EFCC1Q9HA90 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
EFCC1Q9HA90 AC007292.2-201ENST00000593524 1812 ntBASIC17.15■□□□□ 0.34
EFCC1Q9HA90 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC17.15■□□□□ 0.34
EFCC1Q9HA90 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
EFCC1Q9HA90 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
EFCC1Q9HA90 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
EFCC1Q9HA90 Z69890.1-201ENST00000382990 339 ntBASIC17.15■□□□□ 0.34
EFCC1Q9HA90 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC17.15■□□□□ 0.34
EFCC1Q9HA90 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC17.15■□□□□ 0.34
EFCC1Q9HA90 FAU-202ENST00000434372 533 ntTSL 2 BASIC17.15■□□□□ 0.34
EFCC1Q9HA90 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC17.15■□□□□ 0.34
EFCC1Q9HA90 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC17.15■□□□□ 0.34
EFCC1Q9HA90 ALG1L13P-202ENST00000519320 584 ntBASIC17.15■□□□□ 0.34
EFCC1Q9HA90 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
EFCC1Q9HA90 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
EFCC1Q9HA90 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC17.15■□□□□ 0.34
EFCC1Q9HA90 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC17.15■□□□□ 0.34
EFCC1Q9HA90 MBLAC2-202ENST00000514906 1936 ntBASIC17.15■□□□□ 0.34
EFCC1Q9HA90 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
EFCC1Q9HA90 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
EFCC1Q9HA90 AL008718.2-201ENST00000609206 1313 ntBASIC17.15■□□□□ 0.34
EFCC1Q9HA90 AP002414.2-201ENST00000591780 3365 ntBASIC17.15■□□□□ 0.34
EFCC1Q9HA90 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
EFCC1Q9HA90 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
EFCC1Q9HA90 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
EFCC1Q9HA90 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
EFCC1Q9HA90 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC17.15■□□□□ 0.34
EFCC1Q9HA90 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC17.15■□□□□ 0.34
EFCC1Q9HA90 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
EFCC1Q9HA90 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.34
EFCC1Q9HA90 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
EFCC1Q9HA90 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms