Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC13.84□□□□□ -0.19
AMBRA1Q9C0C7 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC13.84□□□□□ -0.19
AMBRA1Q9C0C7 AC093813.1-201ENST00000605066 256 ntBASIC13.84□□□□□ -0.19
AMBRA1Q9C0C7 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
AMBRA1Q9C0C7 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC13.84□□□□□ -0.19
AMBRA1Q9C0C7 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC13.84□□□□□ -0.19
AMBRA1Q9C0C7 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC13.84□□□□□ -0.19
AMBRA1Q9C0C7 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC13.84□□□□□ -0.19
AMBRA1Q9C0C7 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
AMBRA1Q9C0C7 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
AMBRA1Q9C0C7 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC13.84□□□□□ -0.19
AMBRA1Q9C0C7 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
AMBRA1Q9C0C7 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
AMBRA1Q9C0C7 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC13.84□□□□□ -0.19
AMBRA1Q9C0C7 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC13.84□□□□□ -0.19
AMBRA1Q9C0C7 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC13.84□□□□□ -0.19
AMBRA1Q9C0C7 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
AMBRA1Q9C0C7 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC13.84□□□□□ -0.19
AMBRA1Q9C0C7 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
AMBRA1Q9C0C7 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
AMBRA1Q9C0C7 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
AMBRA1Q9C0C7 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
AMBRA1Q9C0C7 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
AMBRA1Q9C0C7 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
AMBRA1Q9C0C7 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
AMBRA1Q9C0C7 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
AMBRA1Q9C0C7 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
AMBRA1Q9C0C7 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
AMBRA1Q9C0C7 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC13.84□□□□□ -0.19
AMBRA1Q9C0C7 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC13.84□□□□□ -0.19
AMBRA1Q9C0C7 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
AMBRA1Q9C0C7 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
AMBRA1Q9C0C7 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
AMBRA1Q9C0C7 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.19
AMBRA1Q9C0C7 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
AMBRA1Q9C0C7 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC13.83□□□□□ -0.19
AMBRA1Q9C0C7 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC13.83□□□□□ -0.19
AMBRA1Q9C0C7 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.19
AMBRA1Q9C0C7 AC068760.1-201ENST00000493579 1953 ntBASIC13.83□□□□□ -0.19
AMBRA1Q9C0C7 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
AMBRA1Q9C0C7 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.19
AMBRA1Q9C0C7 AC004241.5-201ENST00000623870 2448 ntBASIC13.83□□□□□ -0.19
AMBRA1Q9C0C7 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
AMBRA1Q9C0C7 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC13.83□□□□□ -0.2
AMBRA1Q9C0C7 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
AMBRA1Q9C0C7 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
AMBRA1Q9C0C7 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC13.83□□□□□ -0.2
AMBRA1Q9C0C7 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
AMBRA1Q9C0C7 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
AMBRA1Q9C0C7 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
AMBRA1Q9C0C7 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
AMBRA1Q9C0C7 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
AMBRA1Q9C0C7 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
AMBRA1Q9C0C7 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
AMBRA1Q9C0C7 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
AMBRA1Q9C0C7 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
AMBRA1Q9C0C7 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
AMBRA1Q9C0C7 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
AMBRA1Q9C0C7 AL139094.1-201ENST00000405549 1188 ntBASIC13.83□□□□□ -0.2
AMBRA1Q9C0C7 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
AMBRA1Q9C0C7 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
AMBRA1Q9C0C7 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
AMBRA1Q9C0C7 GNAQP1-201ENST00000444815 1067 ntBASIC13.83□□□□□ -0.2
AMBRA1Q9C0C7 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC13.83□□□□□ -0.2
AMBRA1Q9C0C7 KRT17P7-201ENST00000451704 1104 ntBASIC13.83□□□□□ -0.2
AMBRA1Q9C0C7 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
AMBRA1Q9C0C7 TPRX2P-201ENST00000535362 881 ntBASIC13.83□□□□□ -0.2
AMBRA1Q9C0C7 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC13.83□□□□□ -0.2
AMBRA1Q9C0C7 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC13.83□□□□□ -0.2
AMBRA1Q9C0C7 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC13.83□□□□□ -0.2
AMBRA1Q9C0C7 BX539320.1-201ENST00000623759 877 ntBASIC13.83□□□□□ -0.2
AMBRA1Q9C0C7 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC13.83□□□□□ -0.2
AMBRA1Q9C0C7 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
AMBRA1Q9C0C7 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
AMBRA1Q9C0C7 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC13.83□□□□□ -0.2
AMBRA1Q9C0C7 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
AMBRA1Q9C0C7 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
AMBRA1Q9C0C7 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
AMBRA1Q9C0C7 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC13.83□□□□□ -0.2
AMBRA1Q9C0C7 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
AMBRA1Q9C0C7 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
AMBRA1Q9C0C7 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
AMBRA1Q9C0C7 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC13.83□□□□□ -0.2
AMBRA1Q9C0C7 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC13.83□□□□□ -0.2
AMBRA1Q9C0C7 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
AMBRA1Q9C0C7 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
AMBRA1Q9C0C7 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
AMBRA1Q9C0C7 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
AMBRA1Q9C0C7 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
AMBRA1Q9C0C7 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
AMBRA1Q9C0C7 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
AMBRA1Q9C0C7 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
AMBRA1Q9C0C7 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
AMBRA1Q9C0C7 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
AMBRA1Q9C0C7 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
AMBRA1Q9C0C7 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
AMBRA1Q9C0C7 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
AMBRA1Q9C0C7 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
AMBRA1Q9C0C7 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC13.82□□□□□ -0.2
AMBRA1Q9C0C7 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms