Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
UPF3BQ9BZI7 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
UPF3BQ9BZI7 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
UPF3BQ9BZI7 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
UPF3BQ9BZI7 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC17.61■□□□□ 0.41
UPF3BQ9BZI7 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC17.61■□□□□ 0.41
UPF3BQ9BZI7 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
UPF3BQ9BZI7 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
UPF3BQ9BZI7 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
UPF3BQ9BZI7 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC17.61■□□□□ 0.41
UPF3BQ9BZI7 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC17.61■□□□□ 0.41
UPF3BQ9BZI7 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC17.61■□□□□ 0.41
UPF3BQ9BZI7 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
UPF3BQ9BZI7 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
UPF3BQ9BZI7 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
UPF3BQ9BZI7 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC17.61■□□□□ 0.41
UPF3BQ9BZI7 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC17.61■□□□□ 0.41
UPF3BQ9BZI7 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
UPF3BQ9BZI7 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
UPF3BQ9BZI7 PTP4A1P2-201ENST00000546033 454 ntBASIC17.61■□□□□ 0.41
UPF3BQ9BZI7 Six3os1_5.1-201ENST00000611000 271 ntBASIC17.61■□□□□ 0.41
UPF3BQ9BZI7 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC17.61■□□□□ 0.41
UPF3BQ9BZI7 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
UPF3BQ9BZI7 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
UPF3BQ9BZI7 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
UPF3BQ9BZI7 WARS-203ENST00000358655 2466 ntTSL 2 BASIC17.61■□□□□ 0.41
UPF3BQ9BZI7 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
UPF3BQ9BZI7 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
UPF3BQ9BZI7 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
UPF3BQ9BZI7 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
UPF3BQ9BZI7 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
UPF3BQ9BZI7 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
UPF3BQ9BZI7 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC17.61■□□□□ 0.41
UPF3BQ9BZI7 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
UPF3BQ9BZI7 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
UPF3BQ9BZI7 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
UPF3BQ9BZI7 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
UPF3BQ9BZI7 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
UPF3BQ9BZI7 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC17.6■□□□□ 0.41
UPF3BQ9BZI7 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
UPF3BQ9BZI7 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
UPF3BQ9BZI7 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC17.6■□□□□ 0.41
UPF3BQ9BZI7 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
UPF3BQ9BZI7 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
UPF3BQ9BZI7 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
UPF3BQ9BZI7 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC17.6■□□□□ 0.41
UPF3BQ9BZI7 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
UPF3BQ9BZI7 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC17.6■□□□□ 0.41
UPF3BQ9BZI7 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
UPF3BQ9BZI7 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC17.6■□□□□ 0.41
UPF3BQ9BZI7 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
UPF3BQ9BZI7 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
UPF3BQ9BZI7 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
UPF3BQ9BZI7 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
UPF3BQ9BZI7 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
UPF3BQ9BZI7 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC17.6■□□□□ 0.41
UPF3BQ9BZI7 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
UPF3BQ9BZI7 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC17.6■□□□□ 0.41
UPF3BQ9BZI7 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC17.6■□□□□ 0.41
UPF3BQ9BZI7 GNRHR2-203ENST00000581100 1187 ntBASIC17.6■□□□□ 0.41
UPF3BQ9BZI7 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC17.6■□□□□ 0.41
UPF3BQ9BZI7 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC17.6■□□□□ 0.41
UPF3BQ9BZI7 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
UPF3BQ9BZI7 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
UPF3BQ9BZI7 FKBP4P6-201ENST00000457486 1332 ntBASIC17.6■□□□□ 0.41
UPF3BQ9BZI7 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC17.6■□□□□ 0.41
UPF3BQ9BZI7 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC17.6■□□□□ 0.41
UPF3BQ9BZI7 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
UPF3BQ9BZI7 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
UPF3BQ9BZI7 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
UPF3BQ9BZI7 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
UPF3BQ9BZI7 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
UPF3BQ9BZI7 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
UPF3BQ9BZI7 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC17.6■□□□□ 0.41
UPF3BQ9BZI7 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
UPF3BQ9BZI7 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
UPF3BQ9BZI7 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
UPF3BQ9BZI7 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC17.6■□□□□ 0.41
UPF3BQ9BZI7 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC17.6■□□□□ 0.41
UPF3BQ9BZI7 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
UPF3BQ9BZI7 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
UPF3BQ9BZI7 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
UPF3BQ9BZI7 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
UPF3BQ9BZI7 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
UPF3BQ9BZI7 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
UPF3BQ9BZI7 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
UPF3BQ9BZI7 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
UPF3BQ9BZI7 R3HDM2P2-201ENST00000401880 2116 ntBASIC17.59■□□□□ 0.41
UPF3BQ9BZI7 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
UPF3BQ9BZI7 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
UPF3BQ9BZI7 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC17.59■□□□□ 0.41
UPF3BQ9BZI7 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC17.59■□□□□ 0.41
UPF3BQ9BZI7 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
UPF3BQ9BZI7 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC17.59■□□□□ 0.41
UPF3BQ9BZI7 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC17.59■□□□□ 0.41
UPF3BQ9BZI7 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
UPF3BQ9BZI7 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
UPF3BQ9BZI7 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
UPF3BQ9BZI7 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
UPF3BQ9BZI7 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms