Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC14.03□□□□□ -0.16
CNTNAP3Q9BZ76 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CNTNAP3Q9BZ76 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CNTNAP3Q9BZ76 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CNTNAP3Q9BZ76 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CNTNAP3Q9BZ76 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC14.03□□□□□ -0.16
CNTNAP3Q9BZ76 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC14.03□□□□□ -0.16
CNTNAP3Q9BZ76 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CNTNAP3Q9BZ76 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.03□□□□□ -0.16
CNTNAP3Q9BZ76 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CNTNAP3Q9BZ76 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.03□□□□□ -0.16
CNTNAP3Q9BZ76 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CNTNAP3Q9BZ76 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.03□□□□□ -0.16
CNTNAP3Q9BZ76 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
CNTNAP3Q9BZ76 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
CNTNAP3Q9BZ76 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.16
CNTNAP3Q9BZ76 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
CNTNAP3Q9BZ76 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC14.02□□□□□ -0.16
CNTNAP3Q9BZ76 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CNTNAP3Q9BZ76 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CNTNAP3Q9BZ76 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
CNTNAP3Q9BZ76 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
CNTNAP3Q9BZ76 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
CNTNAP3Q9BZ76 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
CNTNAP3Q9BZ76 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
CNTNAP3Q9BZ76 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
CNTNAP3Q9BZ76 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
CNTNAP3Q9BZ76 BABAM2-204ENST00000379624 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CNTNAP3Q9BZ76 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC14.02□□□□□ -0.16
CNTNAP3Q9BZ76 HLA-DQB1-202ENST00000399079 1501 ntBASIC14.02□□□□□ -0.16
CNTNAP3Q9BZ76 RFPL3-201ENST00000249007 1488 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CNTNAP3Q9BZ76 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CNTNAP3Q9BZ76 FKBP4P6-201ENST00000457486 1332 ntBASIC14.02□□□□□ -0.17
CNTNAP3Q9BZ76 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CNTNAP3Q9BZ76 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CNTNAP3Q9BZ76 TREM2-202ENST00000373113 1044 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
CNTNAP3Q9BZ76 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CNTNAP3Q9BZ76 CFL1P6-201ENST00000400899 494 ntBASIC14.02□□□□□ -0.17
CNTNAP3Q9BZ76 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC14.02□□□□□ -0.17
CNTNAP3Q9BZ76 AC027612.2-202ENST00000445955 1199 ntBASIC14.02□□□□□ -0.17
CNTNAP3Q9BZ76 FOXP4-AS1-205ENST00000454812 575 ntTSL 2 BASIC14.02□□□□□ -0.17
CNTNAP3Q9BZ76 SLC25A15P1-201ENST00000456738 342 ntBASIC14.02□□□□□ -0.17
CNTNAP3Q9BZ76 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CNTNAP3Q9BZ76 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14.02□□□□□ -0.17
CNTNAP3Q9BZ76 SLC25A15P3-201ENST00000505530 290 ntBASIC14.02□□□□□ -0.17
CNTNAP3Q9BZ76 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC14.02□□□□□ -0.17
CNTNAP3Q9BZ76 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC14.02□□□□□ -0.17
CNTNAP3Q9BZ76 AP006248.1-201ENST00000610471 67 ntBASIC14.02□□□□□ -0.17
CNTNAP3Q9BZ76 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC14.02□□□□□ -0.17
CNTNAP3Q9BZ76 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
CNTNAP3Q9BZ76 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
CNTNAP3Q9BZ76 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
CNTNAP3Q9BZ76 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
CNTNAP3Q9BZ76 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC14.02□□□□□ -0.17
CNTNAP3Q9BZ76 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
CNTNAP3Q9BZ76 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CNTNAP3Q9BZ76 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
CNTNAP3Q9BZ76 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
CNTNAP3Q9BZ76 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CNTNAP3Q9BZ76 FES-204ENST00000414248 2327 ntTSL 2 BASIC14.02□□□□□ -0.17
CNTNAP3Q9BZ76 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
CNTNAP3Q9BZ76 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CNTNAP3Q9BZ76 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.17
CNTNAP3Q9BZ76 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC14.02□□□□□ -0.17
CNTNAP3Q9BZ76 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CNTNAP3Q9BZ76 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CNTNAP3Q9BZ76 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC14.01□□□□□ -0.17
CNTNAP3Q9BZ76 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC14.01□□□□□ -0.17
CNTNAP3Q9BZ76 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
CNTNAP3Q9BZ76 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CNTNAP3Q9BZ76 AC244394.1-201ENST00000435000 1665 ntBASIC14.01□□□□□ -0.17
CNTNAP3Q9BZ76 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CNTNAP3Q9BZ76 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC14.01□□□□□ -0.17
CNTNAP3Q9BZ76 AC099063.4-201ENST00000641099 1602 ntBASIC14.01□□□□□ -0.17
CNTNAP3Q9BZ76 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
CNTNAP3Q9BZ76 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CNTNAP3Q9BZ76 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CNTNAP3Q9BZ76 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC14.01□□□□□ -0.17
CNTNAP3Q9BZ76 RAN-210ENST00000541630 1475 ntTSL 2 BASIC14.01□□□□□ -0.17
CNTNAP3Q9BZ76 AC012508.2-201ENST00000567613 1472 ntBASIC14.01□□□□□ -0.17
CNTNAP3Q9BZ76 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CNTNAP3Q9BZ76 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CNTNAP3Q9BZ76 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CNTNAP3Q9BZ76 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC14.01□□□□□ -0.17
CNTNAP3Q9BZ76 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CNTNAP3Q9BZ76 RPF1-201ENST00000370654 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CNTNAP3Q9BZ76 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.01□□□□□ -0.17
CNTNAP3Q9BZ76 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC14.01□□□□□ -0.17
CNTNAP3Q9BZ76 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CNTNAP3Q9BZ76 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CNTNAP3Q9BZ76 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CNTNAP3Q9BZ76 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CNTNAP3Q9BZ76 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CNTNAP3Q9BZ76 GYG2-201ENST00000353656 1293 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
CNTNAP3Q9BZ76 HIST1H2BF-201ENST00000356530 1196 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
CNTNAP3Q9BZ76 AL645728.1-201ENST00000366221 2101 ntBASIC14.01□□□□□ -0.17
CNTNAP3Q9BZ76 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC14.01□□□□□ -0.17
CNTNAP3Q9BZ76 TEX33-201ENST00000381821 978 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CNTNAP3Q9BZ76 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
CNTNAP3Q9BZ76 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms