Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC11.25□□□□□ -0.61
VGLL1Q99990 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
VGLL1Q99990 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
VGLL1Q99990 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
VGLL1Q99990 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
VGLL1Q99990 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC11.25□□□□□ -0.61
VGLL1Q99990 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
VGLL1Q99990 NSD2-206ENST00000382895 7827 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
VGLL1Q99990 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
VGLL1Q99990 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC11.25□□□□□ -0.61
VGLL1Q99990 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC11.25□□□□□ -0.61
VGLL1Q99990 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
VGLL1Q99990 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
VGLL1Q99990 MAP4K2-201ENST00000294066 7178 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
VGLL1Q99990 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
VGLL1Q99990 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
VGLL1Q99990 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
VGLL1Q99990 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
VGLL1Q99990 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
VGLL1Q99990 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC11.25□□□□□ -0.61
VGLL1Q99990 MIR943-201ENST00000401286 94 ntBASIC11.25□□□□□ -0.61
VGLL1Q99990 MPV17-208ENST00000405076 603 ntTSL 5 BASIC11.25□□□□□ -0.61
VGLL1Q99990 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
VGLL1Q99990 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC11.25□□□□□ -0.61
VGLL1Q99990 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
VGLL1Q99990 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC11.25□□□□□ -0.61
VGLL1Q99990 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC11.25□□□□□ -0.61
VGLL1Q99990 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
VGLL1Q99990 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC11.25□□□□□ -0.61
VGLL1Q99990 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC11.25□□□□□ -0.61
VGLL1Q99990 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
VGLL1Q99990 FTH1-202ENST00000526640 786 ntTSL 2 BASIC11.25□□□□□ -0.61
VGLL1Q99990 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC11.25□□□□□ -0.61
VGLL1Q99990 AP001160.2-201ENST00000596071 487 ntBASIC11.25□□□□□ -0.61
VGLL1Q99990 AL662799.1-202ENST00000614205 422 ntBASIC11.25□□□□□ -0.61
VGLL1Q99990 AC093028.1-201ENST00000622998 982 ntBASIC11.25□□□□□ -0.61
VGLL1Q99990 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
VGLL1Q99990 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
VGLL1Q99990 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
VGLL1Q99990 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC11.25□□□□□ -0.61
VGLL1Q99990 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC11.25□□□□□ -0.61
VGLL1Q99990 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
VGLL1Q99990 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC11.25□□□□□ -0.61
VGLL1Q99990 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC11.25□□□□□ -0.61
VGLL1Q99990 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
VGLL1Q99990 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC11.25□□□□□ -0.61
VGLL1Q99990 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC11.25□□□□□ -0.61
VGLL1Q99990 KRT8P22-201ENST00000562317 1415 ntBASIC11.25□□□□□ -0.61
VGLL1Q99990 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC11.25□□□□□ -0.61
VGLL1Q99990 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC11.25□□□□□ -0.61
VGLL1Q99990 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
VGLL1Q99990 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
VGLL1Q99990 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC11.25□□□□□ -0.61
VGLL1Q99990 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
VGLL1Q99990 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
VGLL1Q99990 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
VGLL1Q99990 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC11.25□□□□□ -0.61
VGLL1Q99990 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
VGLL1Q99990 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
VGLL1Q99990 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
VGLL1Q99990 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC11.24□□□□□ -0.61
VGLL1Q99990 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
VGLL1Q99990 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
VGLL1Q99990 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
VGLL1Q99990 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
VGLL1Q99990 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
VGLL1Q99990 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
VGLL1Q99990 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
VGLL1Q99990 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC11.24□□□□□ -0.61
VGLL1Q99990 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC11.24□□□□□ -0.61
VGLL1Q99990 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
VGLL1Q99990 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC11.24□□□□□ -0.61
VGLL1Q99990 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC11.24□□□□□ -0.61
VGLL1Q99990 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
VGLL1Q99990 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
VGLL1Q99990 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
VGLL1Q99990 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC11.24□□□□□ -0.61
VGLL1Q99990 RET-205ENST00000615310 4337 ntTSL 5 BASIC11.24□□□□□ -0.61
VGLL1Q99990 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
VGLL1Q99990 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
VGLL1Q99990 ANTXR2-203ENST00000403729 8273 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
VGLL1Q99990 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
VGLL1Q99990 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
VGLL1Q99990 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
VGLL1Q99990 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
VGLL1Q99990 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC11.24□□□□□ -0.61
VGLL1Q99990 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
VGLL1Q99990 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC11.24□□□□□ -0.61
VGLL1Q99990 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
VGLL1Q99990 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
VGLL1Q99990 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC11.24□□□□□ -0.61
VGLL1Q99990 RASL12-203ENST00000434605 982 ntTSL 2 BASIC11.24□□□□□ -0.61
VGLL1Q99990 URGCP-206ENST00000446958 365 ntTSL 2 BASIC11.24□□□□□ -0.61
VGLL1Q99990 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC11.24□□□□□ -0.61
VGLL1Q99990 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC11.24□□□□□ -0.61
VGLL1Q99990 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
VGLL1Q99990 STOM-203ENST00000538954 1257 ntTSL 5 BASIC11.24□□□□□ -0.61
VGLL1Q99990 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC11.24□□□□□ -0.61
VGLL1Q99990 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC11.24□□□□□ -0.61
VGLL1Q99990 RARRES2P5-201ENST00000564013 466 ntBASIC11.24□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms