Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC16.89■□□□□ 0.29
CDK5RAP2Q96SN8 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC16.89■□□□□ 0.29
CDK5RAP2Q96SN8 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDK5RAP2Q96SN8 AC068760.1-201ENST00000493579 1953 ntBASIC16.89■□□□□ 0.29
CDK5RAP2Q96SN8 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CDK5RAP2Q96SN8 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CDK5RAP2Q96SN8 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC16.89■□□□□ 0.29
CDK5RAP2Q96SN8 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CDK5RAP2Q96SN8 GUSBP10-201ENST00000417412 665 ntBASIC16.89■□□□□ 0.29
CDK5RAP2Q96SN8 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDK5RAP2Q96SN8 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CDK5RAP2Q96SN8 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDK5RAP2Q96SN8 AC004837.1-201ENST00000446267 564 ntBASIC16.89■□□□□ 0.29
CDK5RAP2Q96SN8 PIN4P1-201ENST00000451079 396 ntBASIC16.89■□□□□ 0.29
CDK5RAP2Q96SN8 RN7SL788P-201ENST00000460504 316 ntBASIC16.89■□□□□ 0.29
CDK5RAP2Q96SN8 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CDK5RAP2Q96SN8 RN7SL564P-201ENST00000496309 250 ntBASIC16.89■□□□□ 0.29
CDK5RAP2Q96SN8 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
CDK5RAP2Q96SN8 MT3-203ENST00000565838 421 ntTSL 3 BASIC16.89■□□□□ 0.29
CDK5RAP2Q96SN8 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDK5RAP2Q96SN8 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CDK5RAP2Q96SN8 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC16.89■□□□□ 0.29
CDK5RAP2Q96SN8 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDK5RAP2Q96SN8 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CDK5RAP2Q96SN8 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
CDK5RAP2Q96SN8 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC16.89■□□□□ 0.29
CDK5RAP2Q96SN8 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CDK5RAP2Q96SN8 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDK5RAP2Q96SN8 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
CDK5RAP2Q96SN8 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CDK5RAP2Q96SN8 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDK5RAP2Q96SN8 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC16.89■□□□□ 0.29
CDK5RAP2Q96SN8 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC16.89■□□□□ 0.29
CDK5RAP2Q96SN8 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CDK5RAP2Q96SN8 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC16.89■□□□□ 0.29
CDK5RAP2Q96SN8 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CDK5RAP2Q96SN8 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.88■□□□□ 0.29
CDK5RAP2Q96SN8 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDK5RAP2Q96SN8 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC16.88■□□□□ 0.29
CDK5RAP2Q96SN8 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC16.88■□□□□ 0.29
CDK5RAP2Q96SN8 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDK5RAP2Q96SN8 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDK5RAP2Q96SN8 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC16.88■□□□□ 0.29
CDK5RAP2Q96SN8 STK24P1-201ENST00000455035 1291 ntBASIC16.88■□□□□ 0.29
CDK5RAP2Q96SN8 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC16.88■□□□□ 0.29
CDK5RAP2Q96SN8 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC16.88■□□□□ 0.29
CDK5RAP2Q96SN8 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC16.88■□□□□ 0.29
CDK5RAP2Q96SN8 AL139158.3-201ENST00000641212 1562 ntBASIC16.88■□□□□ 0.29
CDK5RAP2Q96SN8 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDK5RAP2Q96SN8 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
CDK5RAP2Q96SN8 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDK5RAP2Q96SN8 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDK5RAP2Q96SN8 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDK5RAP2Q96SN8 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC16.88■□□□□ 0.29
CDK5RAP2Q96SN8 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.88■□□□□ 0.29
CDK5RAP2Q96SN8 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDK5RAP2Q96SN8 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CDK5RAP2Q96SN8 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDK5RAP2Q96SN8 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDK5RAP2Q96SN8 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDK5RAP2Q96SN8 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDK5RAP2Q96SN8 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CDK5RAP2Q96SN8 AC103592.1-201ENST00000394513 664 ntBASIC16.88■□□□□ 0.29
CDK5RAP2Q96SN8 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDK5RAP2Q96SN8 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDK5RAP2Q96SN8 NME4-203ENST00000397722 1232 ntTSL 2 BASIC16.88■□□□□ 0.29
CDK5RAP2Q96SN8 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDK5RAP2Q96SN8 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDK5RAP2Q96SN8 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDK5RAP2Q96SN8 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC16.88■□□□□ 0.29
CDK5RAP2Q96SN8 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC16.88■□□□□ 0.29
CDK5RAP2Q96SN8 ADK-205ENST00000539909 1866 ntTSL 2 BASIC16.88■□□□□ 0.29
CDK5RAP2Q96SN8 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC16.88■□□□□ 0.29
CDK5RAP2Q96SN8 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
CDK5RAP2Q96SN8 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC16.88■□□□□ 0.29
CDK5RAP2Q96SN8 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC16.88■□□□□ 0.29
CDK5RAP2Q96SN8 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CDK5RAP2Q96SN8 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC16.88■□□□□ 0.29
CDK5RAP2Q96SN8 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC16.88■□□□□ 0.29
CDK5RAP2Q96SN8 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDK5RAP2Q96SN8 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDK5RAP2Q96SN8 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDK5RAP2Q96SN8 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC16.87■□□□□ 0.29
CDK5RAP2Q96SN8 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CDK5RAP2Q96SN8 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CDK5RAP2Q96SN8 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDK5RAP2Q96SN8 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDK5RAP2Q96SN8 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC16.87■□□□□ 0.29
CDK5RAP2Q96SN8 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
CDK5RAP2Q96SN8 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC16.87■□□□□ 0.29
CDK5RAP2Q96SN8 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDK5RAP2Q96SN8 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDK5RAP2Q96SN8 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDK5RAP2Q96SN8 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDK5RAP2Q96SN8 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CDK5RAP2Q96SN8 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDK5RAP2Q96SN8 RPL18AP8-201ENST00000486071 528 ntBASIC16.87■□□□□ 0.29
CDK5RAP2Q96SN8 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC16.87■□□□□ 0.29
CDK5RAP2Q96SN8 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CDK5RAP2Q96SN8 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms