Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RAB40CQ96S21 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC12.01□□□□□ -0.49
RAB40CQ96S21 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RAB40CQ96S21 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC12.01□□□□□ -0.49
RAB40CQ96S21 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
RAB40CQ96S21 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC12.01□□□□□ -0.49
RAB40CQ96S21 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RAB40CQ96S21 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
RAB40CQ96S21 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC12.01□□□□□ -0.49
RAB40CQ96S21 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
RAB40CQ96S21 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RAB40CQ96S21 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
RAB40CQ96S21 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RAB40CQ96S21 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC12.01□□□□□ -0.49
RAB40CQ96S21 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
RAB40CQ96S21 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
RAB40CQ96S21 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC12.01□□□□□ -0.49
RAB40CQ96S21 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RAB40CQ96S21 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC12.01□□□□□ -0.49
RAB40CQ96S21 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
RAB40CQ96S21 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
RAB40CQ96S21 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
RAB40CQ96S21 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
RAB40CQ96S21 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC12□□□□□ -0.49
RAB40CQ96S21 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC12□□□□□ -0.49
RAB40CQ96S21 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
RAB40CQ96S21 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
RAB40CQ96S21 HPD-204ENST00000543163 1709 ntTSL 5 BASIC12□□□□□ -0.49
RAB40CQ96S21 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
RAB40CQ96S21 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC12□□□□□ -0.49
RAB40CQ96S21 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
RAB40CQ96S21 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
RAB40CQ96S21 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC12□□□□□ -0.49
RAB40CQ96S21 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
RAB40CQ96S21 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
RAB40CQ96S21 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
RAB40CQ96S21 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
RAB40CQ96S21 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC12□□□□□ -0.49
RAB40CQ96S21 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC12□□□□□ -0.49
RAB40CQ96S21 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
RAB40CQ96S21 TLE1P1-201ENST00000422965 589 ntBASIC12□□□□□ -0.49
RAB40CQ96S21 NUS1P3-201ENST00000423502 862 ntBASIC12□□□□□ -0.49
RAB40CQ96S21 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC12□□□□□ -0.49
RAB40CQ96S21 AC023141.5-201ENST00000458585 616 ntBASIC12□□□□□ -0.49
RAB40CQ96S21 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC12□□□□□ -0.49
RAB40CQ96S21 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC12□□□□□ -0.49
RAB40CQ96S21 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
RAB40CQ96S21 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC12□□□□□ -0.49
RAB40CQ96S21 MIR6080-201ENST00000617359 66 ntBASIC12□□□□□ -0.49
RAB40CQ96S21 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC12□□□□□ -0.49
RAB40CQ96S21 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
RAB40CQ96S21 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
RAB40CQ96S21 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
RAB40CQ96S21 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC12□□□□□ -0.49
RAB40CQ96S21 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
RAB40CQ96S21 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
RAB40CQ96S21 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC12□□□□□ -0.49
RAB40CQ96S21 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
RAB40CQ96S21 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC12□□□□□ -0.49
RAB40CQ96S21 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
RAB40CQ96S21 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
RAB40CQ96S21 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
RAB40CQ96S21 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC12□□□□□ -0.49
RAB40CQ96S21 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC12□□□□□ -0.49
RAB40CQ96S21 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC12□□□□□ -0.49
RAB40CQ96S21 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC12□□□□□ -0.49
RAB40CQ96S21 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC12□□□□□ -0.49
RAB40CQ96S21 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
RAB40CQ96S21 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC12□□□□□ -0.49
RAB40CQ96S21 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
RAB40CQ96S21 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
RAB40CQ96S21 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
RAB40CQ96S21 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
RAB40CQ96S21 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC11.99□□□□□ -0.49
RAB40CQ96S21 HSPA8P5-201ENST00000456928 2069 ntBASIC11.99□□□□□ -0.49
RAB40CQ96S21 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC11.99□□□□□ -0.49
RAB40CQ96S21 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
RAB40CQ96S21 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
RAB40CQ96S21 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
RAB40CQ96S21 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC11.99□□□□□ -0.49
RAB40CQ96S21 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC11.99□□□□□ -0.49
RAB40CQ96S21 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC11.99□□□□□ -0.49
RAB40CQ96S21 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
RAB40CQ96S21 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
RAB40CQ96S21 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
RAB40CQ96S21 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
RAB40CQ96S21 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
RAB40CQ96S21 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC11.99□□□□□ -0.49
RAB40CQ96S21 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC11.99□□□□□ -0.49
RAB40CQ96S21 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC11.99□□□□□ -0.49
RAB40CQ96S21 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC11.99□□□□□ -0.49
RAB40CQ96S21 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC11.99□□□□□ -0.49
RAB40CQ96S21 DNAJB3-202ENST00000449667 1266 ntBASIC11.99□□□□□ -0.49
RAB40CQ96S21 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC11.99□□□□□ -0.49
RAB40CQ96S21 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC11.99□□□□□ -0.49
RAB40CQ96S21 RN7SL618P-201ENST00000477850 296 ntBASIC11.99□□□□□ -0.49
RAB40CQ96S21 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
RAB40CQ96S21 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
RAB40CQ96S21 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
RAB40CQ96S21 GPX4-206ENST00000588919 803 ntTSL 2 BASIC11.99□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 124.7 ms