Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CPNE2Q96FN4 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
CPNE2Q96FN4 AC093028.1-201ENST00000622998 982 ntBASIC12.91□□□□□ -0.34
CPNE2Q96FN4 PRSS30P-206ENST00000641773 873 ntBASIC12.91□□□□□ -0.34
CPNE2Q96FN4 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
CPNE2Q96FN4 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
CPNE2Q96FN4 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CPNE2Q96FN4 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CPNE2Q96FN4 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CPNE2Q96FN4 OR2I1P-208ENST00000641137 4948 ntBASIC12.91□□□□□ -0.34
CPNE2Q96FN4 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
CPNE2Q96FN4 AC152010.1-201ENST00000415779 2006 ntBASIC12.91□□□□□ -0.34
CPNE2Q96FN4 INTS4P2-202ENST00000614726 2019 ntBASIC12.91□□□□□ -0.34
CPNE2Q96FN4 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC12.91□□□□□ -0.34
CPNE2Q96FN4 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CPNE2Q96FN4 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CPNE2Q96FN4 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
CPNE2Q96FN4 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC12.91□□□□□ -0.34
CPNE2Q96FN4 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CPNE2Q96FN4 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
CPNE2Q96FN4 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CPNE2Q96FN4 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC12.91□□□□□ -0.34
CPNE2Q96FN4 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC12.9□□□□□ -0.34
CPNE2Q96FN4 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
CPNE2Q96FN4 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC12.9□□□□□ -0.34
CPNE2Q96FN4 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
CPNE2Q96FN4 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CPNE2Q96FN4 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC12.9□□□□□ -0.34
CPNE2Q96FN4 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC12.9□□□□□ -0.34
CPNE2Q96FN4 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
CPNE2Q96FN4 PTPRVP-205ENST00000641549 5067 ntBASIC12.9□□□□□ -0.34
CPNE2Q96FN4 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
CPNE2Q96FN4 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CPNE2Q96FN4 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
CPNE2Q96FN4 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CPNE2Q96FN4 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
CPNE2Q96FN4 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CPNE2Q96FN4 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC12.9□□□□□ -0.34
CPNE2Q96FN4 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CPNE2Q96FN4 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC12.9□□□□□ -0.34
CPNE2Q96FN4 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CPNE2Q96FN4 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CPNE2Q96FN4 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CPNE2Q96FN4 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CPNE2Q96FN4 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CPNE2Q96FN4 TEX30-203ENST00000376022 828 ntTSL 2 BASIC12.9□□□□□ -0.34
CPNE2Q96FN4 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
CPNE2Q96FN4 TSSK5P-201ENST00000423978 907 ntBASIC12.9□□□□□ -0.34
CPNE2Q96FN4 AC134915.1-201ENST00000426461 574 ntBASIC12.9□□□□□ -0.34
CPNE2Q96FN4 RASL12-203ENST00000434605 982 ntTSL 2 BASIC12.9□□□□□ -0.34
CPNE2Q96FN4 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC12.9□□□□□ -0.34
CPNE2Q96FN4 VDAC1P7-201ENST00000462417 847 ntBASIC12.9□□□□□ -0.34
CPNE2Q96FN4 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
CPNE2Q96FN4 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC12.9□□□□□ -0.34
CPNE2Q96FN4 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CPNE2Q96FN4 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CPNE2Q96FN4 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
CPNE2Q96FN4 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC12.9□□□□□ -0.34
CPNE2Q96FN4 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC12.9□□□□□ -0.34
CPNE2Q96FN4 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC12.9□□□□□ -0.34
CPNE2Q96FN4 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC12.9□□□□□ -0.34
CPNE2Q96FN4 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CPNE2Q96FN4 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CPNE2Q96FN4 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC12.9□□□□□ -0.34
CPNE2Q96FN4 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC12.9□□□□□ -0.34
CPNE2Q96FN4 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC12.9□□□□□ -0.34
CPNE2Q96FN4 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC12.9□□□□□ -0.34
CPNE2Q96FN4 ARL16-202ENST00000570561 768 ntTSL 2 BASIC12.9□□□□□ -0.34
CPNE2Q96FN4 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC12.9□□□□□ -0.34
CPNE2Q96FN4 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC12.9□□□□□ -0.34
CPNE2Q96FN4 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
CPNE2Q96FN4 AL390955.2-201ENST00000603032 514 ntBASIC12.9□□□□□ -0.34
CPNE2Q96FN4 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
CPNE2Q96FN4 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC12.9□□□□□ -0.34
CPNE2Q96FN4 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
CPNE2Q96FN4 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CPNE2Q96FN4 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CPNE2Q96FN4 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CPNE2Q96FN4 AL354702.1-201ENST00000442006 1960 ntBASIC12.9□□□□□ -0.34
CPNE2Q96FN4 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CPNE2Q96FN4 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
CPNE2Q96FN4 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CPNE2Q96FN4 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CPNE2Q96FN4 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CPNE2Q96FN4 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CPNE2Q96FN4 AC092135.3-201ENST00000624151 1846 ntBASIC12.9□□□□□ -0.34
CPNE2Q96FN4 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CPNE2Q96FN4 AC136759.1-202ENST00000530858 2194 ntBASIC12.9□□□□□ -0.34
CPNE2Q96FN4 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
CPNE2Q96FN4 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
CPNE2Q96FN4 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
CPNE2Q96FN4 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
CPNE2Q96FN4 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CPNE2Q96FN4 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CPNE2Q96FN4 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC12.89□□□□□ -0.35
CPNE2Q96FN4 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
CPNE2Q96FN4 ITPR3-202ENST00000605930 9029 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CPNE2Q96FN4 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC12.89□□□□□ -0.35
CPNE2Q96FN4 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC12.89□□□□□ -0.35
CPNE2Q96FN4 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC12.89□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms