Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC17.55■□□□□ 0.4
DDX11Q96FC9 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC17.55■□□□□ 0.4
DDX11Q96FC9 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC17.55■□□□□ 0.4
DDX11Q96FC9 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
DDX11Q96FC9 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC17.55■□□□□ 0.4
DDX11Q96FC9 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC17.55■□□□□ 0.4
DDX11Q96FC9 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
DDX11Q96FC9 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
DDX11Q96FC9 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
DDX11Q96FC9 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
DDX11Q96FC9 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC17.55■□□□□ 0.4
DDX11Q96FC9 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
DDX11Q96FC9 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
DDX11Q96FC9 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
DDX11Q96FC9 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC17.55■□□□□ 0.4
DDX11Q96FC9 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
DDX11Q96FC9 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
DDX11Q96FC9 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
DDX11Q96FC9 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC17.54■□□□□ 0.4
DDX11Q96FC9 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
DDX11Q96FC9 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
DDX11Q96FC9 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC17.54■□□□□ 0.4
DDX11Q96FC9 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC17.54■□□□□ 0.4
DDX11Q96FC9 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC17.54■□□□□ 0.4
DDX11Q96FC9 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
DDX11Q96FC9 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
DDX11Q96FC9 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
DDX11Q96FC9 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
DDX11Q96FC9 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC17.54■□□□□ 0.4
DDX11Q96FC9 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
DDX11Q96FC9 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC17.54■□□□□ 0.4
DDX11Q96FC9 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
DDX11Q96FC9 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
DDX11Q96FC9 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
DDX11Q96FC9 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
DDX11Q96FC9 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
DDX11Q96FC9 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
DDX11Q96FC9 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
DDX11Q96FC9 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC17.54■□□□□ 0.4
DDX11Q96FC9 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC17.54■□□□□ 0.4
DDX11Q96FC9 AC007969.1-201ENST00000433675 447 ntBASIC17.54■□□□□ 0.4
DDX11Q96FC9 MTX1P1-201ENST00000440904 838 ntBASIC17.54■□□□□ 0.4
DDX11Q96FC9 AL591846.1-201ENST00000451736 433 ntBASIC17.54■□□□□ 0.4
DDX11Q96FC9 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
DDX11Q96FC9 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC17.54■□□□□ 0.4
DDX11Q96FC9 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
DDX11Q96FC9 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC17.54■□□□□ 0.4
DDX11Q96FC9 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC17.54■□□□□ 0.4
DDX11Q96FC9 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC17.54■□□□□ 0.4
DDX11Q96FC9 AC004466.1-201ENST00000599515 1080 ntBASIC17.54■□□□□ 0.4
DDX11Q96FC9 AL139099.5-201ENST00000635274 300 ntBASIC17.54■□□□□ 0.4
DDX11Q96FC9 AC068587.10-201ENST00000641210 219 ntBASIC17.54■□□□□ 0.4
DDX11Q96FC9 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
DDX11Q96FC9 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC17.54■□□□□ 0.4
DDX11Q96FC9 AC007326.2-201ENST00000624224 7579 ntBASIC17.54■□□□□ 0.4
DDX11Q96FC9 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
DDX11Q96FC9 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
DDX11Q96FC9 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
DDX11Q96FC9 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
DDX11Q96FC9 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
DDX11Q96FC9 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
DDX11Q96FC9 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
DDX11Q96FC9 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
DDX11Q96FC9 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
DDX11Q96FC9 AC027601.5-201ENST00000624065 2482 ntBASIC17.54■□□□□ 0.4
DDX11Q96FC9 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
DDX11Q96FC9 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
DDX11Q96FC9 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
DDX11Q96FC9 AL354702.1-201ENST00000442006 1960 ntBASIC17.53■□□□□ 0.4
DDX11Q96FC9 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
DDX11Q96FC9 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
DDX11Q96FC9 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
DDX11Q96FC9 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
DDX11Q96FC9 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
DDX11Q96FC9 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC17.53■□□□□ 0.4
DDX11Q96FC9 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
DDX11Q96FC9 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
DDX11Q96FC9 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC17.53■□□□□ 0.4
DDX11Q96FC9 TPI1-206ENST00000488464 791 ntTSL 5 BASIC17.53■□□□□ 0.4
DDX11Q96FC9 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC17.53■□□□□ 0.4
DDX11Q96FC9 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC17.53■□□□□ 0.4
DDX11Q96FC9 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC17.53■□□□□ 0.4
DDX11Q96FC9 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC17.53■□□□□ 0.4
DDX11Q96FC9 EEF1DP1-201ENST00000585891 896 ntBASIC17.53■□□□□ 0.4
DDX11Q96FC9 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC17.53■□□□□ 0.4
DDX11Q96FC9 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
DDX11Q96FC9 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC17.53■□□□□ 0.4
DDX11Q96FC9 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
DDX11Q96FC9 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC17.53■□□□□ 0.4
DDX11Q96FC9 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC17.53■□□□□ 0.4
DDX11Q96FC9 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
DDX11Q96FC9 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
DDX11Q96FC9 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC17.53■□□□□ 0.4
DDX11Q96FC9 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC17.53■□□□□ 0.4
DDX11Q96FC9 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
DDX11Q96FC9 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
DDX11Q96FC9 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC17.53■□□□□ 0.4
DDX11Q96FC9 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
DDX11Q96FC9 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
DDX11Q96FC9 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 118.3 ms