Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-CQ95604 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
HLA-CQ95604 AC008536.3-201ENST00000623282 1599 ntBASIC14.95□□□□□ -0.02
HLA-CQ95604 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC14.95□□□□□ -0.02
HLA-CQ95604 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-CQ95604 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC14.95□□□□□ -0.02
HLA-CQ95604 FRMD6-AS1-201ENST00000617151 2229 ntBASIC14.95□□□□□ -0.02
HLA-CQ95604 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-CQ95604 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
HLA-CQ95604 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.95□□□□□ -0.02
HLA-CQ95604 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
HLA-CQ95604 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
HLA-CQ95604 IFITM1-201ENST00000328221 844 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
HLA-CQ95604 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-CQ95604 SNORA57-201ENST00000383870 149 ntBASIC14.95□□□□□ -0.02
HLA-CQ95604 OLA1P2-201ENST00000395519 1264 ntBASIC14.95□□□□□ -0.02
HLA-CQ95604 FAM197Y6-201ENST00000420524 766 ntBASIC14.95□□□□□ -0.02
HLA-CQ95604 AL137244.1-201ENST00000422931 865 ntBASIC14.95□□□□□ -0.02
HLA-CQ95604 PPP1R2P4-201ENST00000424051 595 ntBASIC14.95□□□□□ -0.02
HLA-CQ95604 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC14.95□□□□□ -0.02
HLA-CQ95604 C10orf91-203ENST00000490765 462 ntTSL 3 BASIC14.95□□□□□ -0.02
HLA-CQ95604 ITGB5-AS1-201ENST00000495917 460 ntTSL 3 BASIC14.95□□□□□ -0.02
HLA-CQ95604 CTBP2P6-201ENST00000526402 1229 ntBASIC14.95□□□□□ -0.02
HLA-CQ95604 AC007656.1-201ENST00000552238 573 ntTSL 4 BASIC14.95□□□□□ -0.02
HLA-CQ95604 AC073896.4-201ENST00000553176 403 ntTSL 2 BASIC14.95□□□□□ -0.02
HLA-CQ95604 APOPT1-215ENST00000556253 783 ntTSL 3 BASIC14.95□□□□□ -0.02
HLA-CQ95604 AC020892.1-201ENST00000559918 855 ntTSL 2 BASIC14.95□□□□□ -0.02
HLA-CQ95604 AC022558.1-201ENST00000560450 454 ntTSL 3 BASIC14.95□□□□□ -0.02
HLA-CQ95604 NT5C-204ENST00000578337 582 ntTSL 2 BASIC14.95□□□□□ -0.02
HLA-CQ95604 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC14.95□□□□□ -0.02
HLA-CQ95604 KXD1-211ENST00000599319 707 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
HLA-CQ95604 AC016586.1-201ENST00000600056 684 ntTSL 3 BASIC14.95□□□□□ -0.02
HLA-CQ95604 AC090510.3-201ENST00000615831 821 ntBASIC14.95□□□□□ -0.02
HLA-CQ95604 AC090386.2-201ENST00000623010 1039 ntBASIC14.95□□□□□ -0.02
HLA-CQ95604 LINC01869-204ENST00000635639 1047 ntTSL 5 BASIC14.95□□□□□ -0.02
HLA-CQ95604 AC105250.1-201ENST00000509378 2057 ntBASIC14.95□□□□□ -0.02
HLA-CQ95604 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
HLA-CQ95604 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-CQ95604 COQ4-201ENST00000300452 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-CQ95604 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC14.95□□□□□ -0.02
HLA-CQ95604 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC14.95□□□□□ -0.02
HLA-CQ95604 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-CQ95604 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-CQ95604 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC14.95□□□□□ -0.02
HLA-CQ95604 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC14.95□□□□□ -0.02
HLA-CQ95604 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
HLA-CQ95604 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-CQ95604 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-CQ95604 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-CQ95604 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC14.95□□□□□ -0.02
HLA-CQ95604 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
HLA-CQ95604 AC022211.2-201ENST00000585075 2527 ntBASIC14.95□□□□□ -0.02
HLA-CQ95604 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.95□□□□□ -0.02
HLA-CQ95604 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-CQ95604 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
HLA-CQ95604 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-CQ95604 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-CQ95604 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-CQ95604 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
HLA-CQ95604 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-CQ95604 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-CQ95604 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-CQ95604 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.94□□□□□ -0.02
HLA-CQ95604 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-CQ95604 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC14.94□□□□□ -0.02
HLA-CQ95604 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-CQ95604 KCTD6-205ENST00000490264 1759 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
HLA-CQ95604 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-CQ95604 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC14.94□□□□□ -0.02
HLA-CQ95604 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-CQ95604 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-CQ95604 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-CQ95604 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-CQ95604 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
HLA-CQ95604 CLCC1-202ENST00000348264 1124 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-CQ95604 NCR1-204ENST00000357397 594 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-CQ95604 HIST1H4B-201ENST00000377745 438 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
HLA-CQ95604 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-CQ95604 DKKL1P1-201ENST00000400550 698 ntBASIC14.94□□□□□ -0.02
HLA-CQ95604 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-CQ95604 PPP1R7-205ENST00000404405 1009 ntTSL 3 BASIC14.94□□□□□ -0.02
HLA-CQ95604 PRAME-206ENST00000406503 740 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
HLA-CQ95604 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC14.94□□□□□ -0.02
HLA-CQ95604 OR52M2P-201ENST00000414298 959 ntBASIC14.94□□□□□ -0.02
HLA-CQ95604 RPL15-208ENST00000435882 1063 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
HLA-CQ95604 FOXP4-AS1-205ENST00000454812 575 ntTSL 2 BASIC14.94□□□□□ -0.02
HLA-CQ95604 IGKV1OR-2-201ENST00000457995 350 ntBASIC14.94□□□□□ -0.02
HLA-CQ95604 AC078785.1-204ENST00000460707 764 ntTSL 3 BASIC14.94□□□□□ -0.02
HLA-CQ95604 RN7SL128P-201ENST00000467883 305 ntBASIC14.94□□□□□ -0.02
HLA-CQ95604 AC025171.3-201ENST00000509036 472 ntTSL 2 BASIC14.94□□□□□ -0.02
HLA-CQ95604 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-CQ95604 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-CQ95604 BID-209ENST00000551952 700 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-CQ95604 PPCDC-206ENST00000564923 757 ntTSL 5 BASIC14.94□□□□□ -0.02
HLA-CQ95604 TRAPPC2L-212ENST00000567312 499 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-CQ95604 MT1G-203ENST00000568675 628 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-CQ95604 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-CQ95604 AC254633.1-201ENST00000606790 345 ntBASIC14.94□□□□□ -0.02
HLA-CQ95604 AC004466.2-201ENST00000614749 516 ntBASIC14.94□□□□□ -0.02
HLA-CQ95604 AC139713.2-207ENST00000641556 1292 ntBASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms