Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
USP9XQ93008 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC12.56□□□□□ -0.4
USP9XQ93008 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
USP9XQ93008 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC12.56□□□□□ -0.4
USP9XQ93008 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
USP9XQ93008 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
USP9XQ93008 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
USP9XQ93008 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
USP9XQ93008 HNRNPA1P2-207ENST00000432375 960 ntBASIC12.56□□□□□ -0.4
USP9XQ93008 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC12.56□□□□□ -0.4
USP9XQ93008 AC004889.1-201ENST00000498693 856 ntTSL 5 BASIC12.56□□□□□ -0.4
USP9XQ93008 AC026412.1-206ENST00000502273 206 ntBASIC12.56□□□□□ -0.4
USP9XQ93008 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
USP9XQ93008 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
USP9XQ93008 HNRNPA1P5-201ENST00000558213 966 ntBASIC12.56□□□□□ -0.4
USP9XQ93008 KRT8P34-201ENST00000577607 1044 ntBASIC12.56□□□□□ -0.4
USP9XQ93008 SNORD3B-1-201ENST00000577988 758 ntBASIC12.56□□□□□ -0.4
USP9XQ93008 MCM8-AS1-201ENST00000613522 983 ntTSL 2 BASIC12.56□□□□□ -0.4
USP9XQ93008 TARM1-202ENST00000616041 1218 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
USP9XQ93008 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
USP9XQ93008 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC12.56□□□□□ -0.4
USP9XQ93008 AL050341.2-201ENST00000567508 1541 ntBASIC12.56□□□□□ -0.4
USP9XQ93008 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
USP9XQ93008 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
USP9XQ93008 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
USP9XQ93008 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
USP9XQ93008 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
USP9XQ93008 BLK-205ENST00000529894 2017 ntTSL 5 BASIC12.55□□□□□ -0.4
USP9XQ93008 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC12.55□□□□□ -0.4
USP9XQ93008 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
USP9XQ93008 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC12.55□□□□□ -0.4
USP9XQ93008 KRTAP2-3-201ENST00000391418 875 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
USP9XQ93008 LINC00303-203ENST00000427799 1028 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
USP9XQ93008 LINC01502-203ENST00000447907 880 ntTSL 3 BASIC12.55□□□□□ -0.4
USP9XQ93008 AL121894.1-201ENST00000450971 436 ntTSL 2 BASIC12.55□□□□□ -0.4
USP9XQ93008 AC025186.1-201ENST00000478174 870 ntBASIC12.55□□□□□ -0.4
USP9XQ93008 AC011431.1-201ENST00000512971 230 ntBASIC12.55□□□□□ -0.4
USP9XQ93008 HOXC-AS3-203ENST00000514702 368 ntTSL 3 BASIC12.55□□□□□ -0.4
USP9XQ93008 AC010127.1-202ENST00000597623 713 ntTSL 2 BASIC12.55□□□□□ -0.4
USP9XQ93008 FXYD3-206ENST00000603524 742 ntTSL 3 BASIC12.55□□□□□ -0.4
USP9XQ93008 FXYD3-211ENST00000604804 564 ntTSL 4 BASIC12.55□□□□□ -0.4
USP9XQ93008 LINC00244-201ENST00000625073 613 ntBASIC12.55□□□□□ -0.4
USP9XQ93008 OAZ3-207ENST00000627780 850 ntTSL 5 BASIC12.55□□□□□ -0.4
USP9XQ93008 OAZ3-209ENST00000635322 745 ntTSL 5 BASIC12.55□□□□□ -0.4
USP9XQ93008 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC12.55□□□□□ -0.4
USP9XQ93008 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
USP9XQ93008 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC12.55□□□□□ -0.4
USP9XQ93008 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC12.55□□□□□ -0.4
USP9XQ93008 PTGR1-205ENST00000407693 1407 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
USP9XQ93008 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC12.55□□□□□ -0.4
USP9XQ93008 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
USP9XQ93008 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC12.55□□□□□ -0.4
USP9XQ93008 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC12.55□□□□□ -0.4
USP9XQ93008 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
USP9XQ93008 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC12.55□□□□□ -0.4
USP9XQ93008 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
USP9XQ93008 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
USP9XQ93008 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
USP9XQ93008 VDAC2-202ENST00000313132 1467 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
USP9XQ93008 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
USP9XQ93008 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
USP9XQ93008 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC12.55□□□□□ -0.4
USP9XQ93008 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
USP9XQ93008 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
USP9XQ93008 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC12.55□□□□□ -0.4
USP9XQ93008 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
USP9XQ93008 IL37-204ENST00000352179 709 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
USP9XQ93008 FAM21EP-201ENST00000417804 985 ntBASIC12.55□□□□□ -0.4
USP9XQ93008 KCNK15-AS1-202ENST00000427303 528 ntTSL 5 BASIC12.55□□□□□ -0.4
USP9XQ93008 LINC01693-202ENST00000430123 357 ntTSL 3 BASIC12.55□□□□□ -0.4
USP9XQ93008 IFNWP2-201ENST00000431203 580 ntBASIC12.55□□□□□ -0.4
USP9XQ93008 NRADDP-201ENST00000437305 691 ntBASIC12.55□□□□□ -0.4
USP9XQ93008 ALG1L15P-201ENST00000482834 794 ntBASIC12.55□□□□□ -0.4
USP9XQ93008 GPX3-202ENST00000517973 612 ntTSL 3 BASIC12.55□□□□□ -0.4
USP9XQ93008 TROAP-209ENST00000549275 348 ntAPPRIS ALT2 TSL 3 BASIC12.55□□□□□ -0.4
USP9XQ93008 TROAP-210ENST00000549534 839 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
USP9XQ93008 MIAT_exon5_3.1-201ENST00000613656 377 ntBASIC12.55□□□□□ -0.4
USP9XQ93008 AC005746.3-201ENST00000614751 393 ntBASIC12.55□□□□□ -0.4
USP9XQ93008 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
USP9XQ93008 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
USP9XQ93008 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
USP9XQ93008 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC12.55□□□□□ -0.4
USP9XQ93008 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC12.55□□□□□ -0.4
USP9XQ93008 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
USP9XQ93008 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
USP9XQ93008 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
USP9XQ93008 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC12.54□□□□□ -0.4
USP9XQ93008 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
USP9XQ93008 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC12.54□□□□□ -0.4
USP9XQ93008 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
USP9XQ93008 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
USP9XQ93008 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
USP9XQ93008 B3GNTL1-201ENST00000320865 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
USP9XQ93008 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
USP9XQ93008 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC12.54□□□□□ -0.4
USP9XQ93008 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC12.54□□□□□ -0.4
USP9XQ93008 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
USP9XQ93008 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
USP9XQ93008 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
USP9XQ93008 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms