Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HPS1Q92902 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HPS1Q92902 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC13.67□□□□□ -0.22
HPS1Q92902 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HPS1Q92902 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HPS1Q92902 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC13.67□□□□□ -0.22
HPS1Q92902 CR383656.12-201ENST00000549567 513 ntBASIC13.67□□□□□ -0.22
HPS1Q92902 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC13.67□□□□□ -0.22
HPS1Q92902 MPI-209ENST00000564003 1195 ntTSL 2 BASIC13.67□□□□□ -0.22
HPS1Q92902 LITAF-210ENST00000571976 548 ntTSL 2 BASIC13.67□□□□□ -0.22
HPS1Q92902 LITAF-214ENST00000574703 486 ntTSL 2 BASIC13.67□□□□□ -0.22
HPS1Q92902 AL138828.2-201ENST00000615812 383 ntBASIC13.67□□□□□ -0.22
HPS1Q92902 AC008147.4-201ENST00000617570 1204 ntBASIC13.67□□□□□ -0.22
HPS1Q92902 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HPS1Q92902 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC13.67□□□□□ -0.22
HPS1Q92902 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
HPS1Q92902 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HPS1Q92902 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
HPS1Q92902 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HPS1Q92902 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC13.67□□□□□ -0.22
HPS1Q92902 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HPS1Q92902 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
HPS1Q92902 TKT-202ENST00000423516 2075 ntTSL 2 BASIC13.67□□□□□ -0.22
HPS1Q92902 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
HPS1Q92902 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
HPS1Q92902 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HPS1Q92902 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HPS1Q92902 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
HPS1Q92902 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
HPS1Q92902 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
HPS1Q92902 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
HPS1Q92902 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HPS1Q92902 FUK-202ENST00000378912 3925 ntTSL 2 BASIC13.66□□□□□ -0.22
HPS1Q92902 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
HPS1Q92902 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HPS1Q92902 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC13.66□□□□□ -0.22
HPS1Q92902 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HPS1Q92902 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
HPS1Q92902 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
HPS1Q92902 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HPS1Q92902 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC13.66□□□□□ -0.22
HPS1Q92902 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
HPS1Q92902 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HPS1Q92902 RPS19-201ENST00000221975 500 ntTSL 3 BASIC13.66□□□□□ -0.22
HPS1Q92902 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HPS1Q92902 HAUS4P1-201ENST00000406739 1145 ntBASIC13.66□□□□□ -0.22
HPS1Q92902 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC13.66□□□□□ -0.22
HPS1Q92902 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC13.66□□□□□ -0.22
HPS1Q92902 FAM9B-203ENST00000428477 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HPS1Q92902 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC13.66□□□□□ -0.22
HPS1Q92902 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
HPS1Q92902 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC13.66□□□□□ -0.22
HPS1Q92902 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC13.66□□□□□ -0.22
HPS1Q92902 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC13.66□□□□□ -0.22
HPS1Q92902 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
HPS1Q92902 AC243562.2-201ENST00000561247 970 ntBASIC13.66□□□□□ -0.22
HPS1Q92902 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC13.66□□□□□ -0.22
HPS1Q92902 NAA38-207ENST00000576861 556 ntTSL 3 BASIC13.66□□□□□ -0.22
HPS1Q92902 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HPS1Q92902 AC005954.1-201ENST00000591962 337 ntTSL 3 BASIC13.66□□□□□ -0.22
HPS1Q92902 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
HPS1Q92902 AL355816.2-201ENST00000610049 647 ntBASIC13.66□□□□□ -0.22
HPS1Q92902 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC13.66□□□□□ -0.22
HPS1Q92902 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
HPS1Q92902 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HPS1Q92902 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
HPS1Q92902 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
HPS1Q92902 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
HPS1Q92902 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
HPS1Q92902 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HPS1Q92902 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC13.66□□□□□ -0.22
HPS1Q92902 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
HPS1Q92902 SMTN-203ENST00000358743 3198 ntAPPRIS P4 TSL 2 BASIC13.66□□□□□ -0.22
HPS1Q92902 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
HPS1Q92902 IRF2BPL-201ENST00000238647 4157 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
HPS1Q92902 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
HPS1Q92902 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.66□□□□□ -0.22
HPS1Q92902 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC13.66□□□□□ -0.22
HPS1Q92902 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC13.66□□□□□ -0.22
HPS1Q92902 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC13.66□□□□□ -0.22
HPS1Q92902 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
HPS1Q92902 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC13.66□□□□□ -0.22
HPS1Q92902 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
HPS1Q92902 AC087499.5-201ENST00000452760 1342 ntBASIC13.65□□□□□ -0.22
HPS1Q92902 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
HPS1Q92902 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC13.65□□□□□ -0.22
HPS1Q92902 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
HPS1Q92902 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HPS1Q92902 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC13.65□□□□□ -0.22
HPS1Q92902 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HPS1Q92902 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HPS1Q92902 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC13.65□□□□□ -0.22
HPS1Q92902 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HPS1Q92902 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC13.65□□□□□ -0.22
HPS1Q92902 MIR193BHG-211ENST00000641433 5365 ntBASIC13.65□□□□□ -0.22
HPS1Q92902 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HPS1Q92902 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
HPS1Q92902 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC13.65□□□□□ -0.22
HPS1Q92902 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
HPS1Q92902 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms