Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
TRAF3IP1Q8TDR0 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAF3IP1Q8TDR0 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAF3IP1Q8TDR0 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
TRAF3IP1Q8TDR0 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAF3IP1Q8TDR0 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRAF3IP1Q8TDR0 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAF3IP1Q8TDR0 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAF3IP1Q8TDR0 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAF3IP1Q8TDR0 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAF3IP1Q8TDR0 AC152010.1-201ENST00000415779 2006 ntBASIC15.41■□□□□ 0.06
TRAF3IP1Q8TDR0 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAF3IP1Q8TDR0 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
TRAF3IP1Q8TDR0 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAF3IP1Q8TDR0 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
TRAF3IP1Q8TDR0 CLUHP2-201ENST00000426660 1303 ntBASIC15.41■□□□□ 0.06
TRAF3IP1Q8TDR0 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC15.41■□□□□ 0.06
TRAF3IP1Q8TDR0 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC15.4■□□□□ 0.06
TRAF3IP1Q8TDR0 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
TRAF3IP1Q8TDR0 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC15.4■□□□□ 0.06
TRAF3IP1Q8TDR0 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC15.4■□□□□ 0.06
TRAF3IP1Q8TDR0 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
TRAF3IP1Q8TDR0 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
TRAF3IP1Q8TDR0 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
TRAF3IP1Q8TDR0 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC15.4■□□□□ 0.06
TRAF3IP1Q8TDR0 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAF3IP1Q8TDR0 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC15.4■□□□□ 0.06
TRAF3IP1Q8TDR0 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAF3IP1Q8TDR0 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAF3IP1Q8TDR0 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
TRAF3IP1Q8TDR0 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRAF3IP1Q8TDR0 AC011840.2-201ENST00000563063 1520 ntBASIC15.4■□□□□ 0.06
TRAF3IP1Q8TDR0 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRAF3IP1Q8TDR0 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAF3IP1Q8TDR0 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAF3IP1Q8TDR0 TPM3P8-201ENST00000330554 643 ntBASIC15.4■□□□□ 0.06
TRAF3IP1Q8TDR0 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC15.4■□□□□ 0.06
TRAF3IP1Q8TDR0 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC15.4■□□□□ 0.06
TRAF3IP1Q8TDR0 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRAF3IP1Q8TDR0 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRAF3IP1Q8TDR0 FTLP10-202ENST00000505798 471 ntBASIC15.4■□□□□ 0.06
TRAF3IP1Q8TDR0 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
TRAF3IP1Q8TDR0 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRAF3IP1Q8TDR0 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRAF3IP1Q8TDR0 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC15.4■□□□□ 0.06
TRAF3IP1Q8TDR0 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC15.4■□□□□ 0.06
TRAF3IP1Q8TDR0 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC15.4■□□□□ 0.06
TRAF3IP1Q8TDR0 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAF3IP1Q8TDR0 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRAF3IP1Q8TDR0 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAF3IP1Q8TDR0 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAF3IP1Q8TDR0 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRAF3IP1Q8TDR0 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAF3IP1Q8TDR0 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAF3IP1Q8TDR0 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAF3IP1Q8TDR0 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAF3IP1Q8TDR0 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRAF3IP1Q8TDR0 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
TRAF3IP1Q8TDR0 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAF3IP1Q8TDR0 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRAF3IP1Q8TDR0 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
TRAF3IP1Q8TDR0 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAF3IP1Q8TDR0 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRAF3IP1Q8TDR0 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAF3IP1Q8TDR0 FKBP4P6-201ENST00000457486 1332 ntBASIC15.4■□□□□ 0.06
TRAF3IP1Q8TDR0 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC15.4■□□□□ 0.06
TRAF3IP1Q8TDR0 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAF3IP1Q8TDR0 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAF3IP1Q8TDR0 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAF3IP1Q8TDR0 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAF3IP1Q8TDR0 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAF3IP1Q8TDR0 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
TRAF3IP1Q8TDR0 AC015688.4-201ENST00000580780 1647 ntBASIC15.39■□□□□ 0.05
TRAF3IP1Q8TDR0 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRAF3IP1Q8TDR0 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC15.39■□□□□ 0.05
TRAF3IP1Q8TDR0 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC15.39■□□□□ 0.05
TRAF3IP1Q8TDR0 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC15.39■□□□□ 0.05
TRAF3IP1Q8TDR0 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
TRAF3IP1Q8TDR0 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRAF3IP1Q8TDR0 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAF3IP1Q8TDR0 POM121L8P-201ENST00000417732 1281 ntBASIC15.39■□□□□ 0.05
TRAF3IP1Q8TDR0 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
TRAF3IP1Q8TDR0 HMGN1P19-201ENST00000436976 333 ntBASIC15.39■□□□□ 0.05
TRAF3IP1Q8TDR0 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC15.39■□□□□ 0.05
TRAF3IP1Q8TDR0 POM121L9P-203ENST00000441984 1285 ntBASIC15.39■□□□□ 0.05
TRAF3IP1Q8TDR0 AC007389.4-201ENST00000454674 793 ntBASIC15.39■□□□□ 0.05
TRAF3IP1Q8TDR0 MESTP3-201ENST00000503460 968 ntBASIC15.39■□□□□ 0.05
TRAF3IP1Q8TDR0 AC106760.1-201ENST00000508690 800 ntBASIC15.39■□□□□ 0.05
TRAF3IP1Q8TDR0 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAF3IP1Q8TDR0 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC15.39■□□□□ 0.05
TRAF3IP1Q8TDR0 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRAF3IP1Q8TDR0 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC15.39■□□□□ 0.05
TRAF3IP1Q8TDR0 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC15.39■□□□□ 0.05
TRAF3IP1Q8TDR0 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC15.39■□□□□ 0.05
TRAF3IP1Q8TDR0 AC138696.2-201ENST00000607376 223 ntBASIC15.39■□□□□ 0.05
TRAF3IP1Q8TDR0 AC138466.3-201ENST00000619983 221 ntBASIC15.39■□□□□ 0.05
TRAF3IP1Q8TDR0 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC15.39■□□□□ 0.05
TRAF3IP1Q8TDR0 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC15.39■□□□□ 0.05
TRAF3IP1Q8TDR0 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAF3IP1Q8TDR0 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms