Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SMARCC2Q8TAQ2 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC17.23■□□□□ 0.35
SMARCC2Q8TAQ2 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC17.22■□□□□ 0.35
SMARCC2Q8TAQ2 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SMARCC2Q8TAQ2 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
SMARCC2Q8TAQ2 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
SMARCC2Q8TAQ2 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMARCC2Q8TAQ2 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
SMARCC2Q8TAQ2 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
SMARCC2Q8TAQ2 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMARCC2Q8TAQ2 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC17.22■□□□□ 0.35
SMARCC2Q8TAQ2 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC17.22■□□□□ 0.35
SMARCC2Q8TAQ2 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC17.22■□□□□ 0.35
SMARCC2Q8TAQ2 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
SMARCC2Q8TAQ2 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC17.22■□□□□ 0.35
SMARCC2Q8TAQ2 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC17.22■□□□□ 0.35
SMARCC2Q8TAQ2 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMARCC2Q8TAQ2 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SMARCC2Q8TAQ2 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC17.22■□□□□ 0.35
SMARCC2Q8TAQ2 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SMARCC2Q8TAQ2 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC17.22■□□□□ 0.35
SMARCC2Q8TAQ2 AC092658.1-201ENST00000505836 891 ntBASIC17.22■□□□□ 0.35
SMARCC2Q8TAQ2 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC17.22■□□□□ 0.35
SMARCC2Q8TAQ2 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC17.22■□□□□ 0.35
SMARCC2Q8TAQ2 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC17.22■□□□□ 0.35
SMARCC2Q8TAQ2 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC17.22■□□□□ 0.35
SMARCC2Q8TAQ2 RN7SL713P-201ENST00000582127 302 ntBASIC17.22■□□□□ 0.35
SMARCC2Q8TAQ2 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMARCC2Q8TAQ2 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC17.22■□□□□ 0.35
SMARCC2Q8TAQ2 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMARCC2Q8TAQ2 CICP16-201ENST00000502609 2813 ntBASIC17.22■□□□□ 0.35
SMARCC2Q8TAQ2 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SMARCC2Q8TAQ2 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC17.22■□□□□ 0.35
SMARCC2Q8TAQ2 AC005840.4-201ENST00000541242 2494 ntBASIC17.22■□□□□ 0.35
SMARCC2Q8TAQ2 AL161772.1-201ENST00000610494 4412 ntBASIC17.22■□□□□ 0.35
SMARCC2Q8TAQ2 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
SMARCC2Q8TAQ2 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SMARCC2Q8TAQ2 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
SMARCC2Q8TAQ2 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
SMARCC2Q8TAQ2 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC17.21■□□□□ 0.35
SMARCC2Q8TAQ2 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMARCC2Q8TAQ2 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
SMARCC2Q8TAQ2 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC17.21■□□□□ 0.35
SMARCC2Q8TAQ2 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMARCC2Q8TAQ2 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC17.21■□□□□ 0.35
SMARCC2Q8TAQ2 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMARCC2Q8TAQ2 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC17.21■□□□□ 0.35
SMARCC2Q8TAQ2 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC17.21■□□□□ 0.35
SMARCC2Q8TAQ2 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
SMARCC2Q8TAQ2 F10-203ENST00000409306 1450 ntTSL 3 BASIC17.21■□□□□ 0.35
SMARCC2Q8TAQ2 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMARCC2Q8TAQ2 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMARCC2Q8TAQ2 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMARCC2Q8TAQ2 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC17.21■□□□□ 0.35
SMARCC2Q8TAQ2 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC17.21■□□□□ 0.35
SMARCC2Q8TAQ2 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC17.21■□□□□ 0.35
SMARCC2Q8TAQ2 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SMARCC2Q8TAQ2 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SMARCC2Q8TAQ2 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC17.21■□□□□ 0.35
SMARCC2Q8TAQ2 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC17.21■□□□□ 0.35
SMARCC2Q8TAQ2 RIT1-205ENST00000539040 919 ntTSL 2 BASIC17.21■□□□□ 0.35
SMARCC2Q8TAQ2 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC17.21■□□□□ 0.35
SMARCC2Q8TAQ2 C2orf69P2-201ENST00000562032 1123 ntBASIC17.21■□□□□ 0.35
SMARCC2Q8TAQ2 MIR6799-201ENST00000620297 69 ntBASIC17.21■□□□□ 0.35
SMARCC2Q8TAQ2 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC17.21■□□□□ 0.35
SMARCC2Q8TAQ2 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC17.21■□□□□ 0.35
SMARCC2Q8TAQ2 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMARCC2Q8TAQ2 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMARCC2Q8TAQ2 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMARCC2Q8TAQ2 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMARCC2Q8TAQ2 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SMARCC2Q8TAQ2 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMARCC2Q8TAQ2 C1R-201ENST00000535233 2211 ntTSL 2 BASIC17.21■□□□□ 0.35
SMARCC2Q8TAQ2 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMARCC2Q8TAQ2 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
SMARCC2Q8TAQ2 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC17.21■□□□□ 0.35
SMARCC2Q8TAQ2 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMARCC2Q8TAQ2 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC17.21■□□□□ 0.35
SMARCC2Q8TAQ2 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
SMARCC2Q8TAQ2 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC17.21■□□□□ 0.34
SMARCC2Q8TAQ2 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
SMARCC2Q8TAQ2 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC17.21■□□□□ 0.34
SMARCC2Q8TAQ2 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC17.2■□□□□ 0.34
SMARCC2Q8TAQ2 AC011474.4-201ENST00000623523 2076 ntBASIC17.2■□□□□ 0.34
SMARCC2Q8TAQ2 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SMARCC2Q8TAQ2 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SMARCC2Q8TAQ2 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SMARCC2Q8TAQ2 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC17.2■□□□□ 0.34
SMARCC2Q8TAQ2 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SMARCC2Q8TAQ2 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
SMARCC2Q8TAQ2 OS9-207ENST00000439210 1946 ntTSL 2 BASIC17.2■□□□□ 0.34
SMARCC2Q8TAQ2 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SMARCC2Q8TAQ2 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SMARCC2Q8TAQ2 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SMARCC2Q8TAQ2 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC17.2■□□□□ 0.34
SMARCC2Q8TAQ2 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SMARCC2Q8TAQ2 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SMARCC2Q8TAQ2 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC17.2■□□□□ 0.34
SMARCC2Q8TAQ2 FAM86MP-201ENST00000340703 885 ntBASIC17.2■□□□□ 0.34
SMARCC2Q8TAQ2 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms