Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 AP002414.2-201ENST00000591780 3365 ntBASIC14.92□□□□□ -0.02
SYNPOQ8N3V7 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
SYNPOQ8N3V7 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14.92□□□□□ -0.02
SYNPOQ8N3V7 POR-201ENST00000394893 2532 ntTSL 5 BASIC14.92□□□□□ -0.02
SYNPOQ8N3V7 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SYNPOQ8N3V7 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC14.92□□□□□ -0.02
SYNPOQ8N3V7 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
SYNPOQ8N3V7 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SYNPOQ8N3V7 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SYNPOQ8N3V7 BANF1P3-201ENST00000412556 261 ntBASIC14.92□□□□□ -0.02
SYNPOQ8N3V7 PFN2-202ENST00000423691 911 ntTSL 2 BASIC14.92□□□□□ -0.02
SYNPOQ8N3V7 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SYNPOQ8N3V7 DUTP3-201ENST00000450025 415 ntBASIC14.92□□□□□ -0.02
SYNPOQ8N3V7 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC14.92□□□□□ -0.02
SYNPOQ8N3V7 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
SYNPOQ8N3V7 GMFG-209ENST00000600322 622 ntTSL 5 BASIC14.92□□□□□ -0.02
SYNPOQ8N3V7 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC14.92□□□□□ -0.02
SYNPOQ8N3V7 AC087392.5-201ENST00000612517 489 ntBASIC14.92□□□□□ -0.02
SYNPOQ8N3V7 MIR6842-201ENST00000612539 65 ntBASIC14.92□□□□□ -0.02
SYNPOQ8N3V7 AC007718.1-201ENST00000621078 280 ntBASIC14.92□□□□□ -0.02
SYNPOQ8N3V7 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
SYNPOQ8N3V7 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SYNPOQ8N3V7 CYP4F23P-201ENST00000593402 1579 ntBASIC14.92□□□□□ -0.02
SYNPOQ8N3V7 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
SYNPOQ8N3V7 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.92□□□□□ -0.02
SYNPOQ8N3V7 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SYNPOQ8N3V7 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
SYNPOQ8N3V7 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC14.92□□□□□ -0.02
SYNPOQ8N3V7 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SYNPOQ8N3V7 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SYNPOQ8N3V7 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
SYNPOQ8N3V7 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC14.92□□□□□ -0.02
SYNPOQ8N3V7 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
SYNPOQ8N3V7 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC14.92□□□□□ -0.02
SYNPOQ8N3V7 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC14.92□□□□□ -0.02
SYNPOQ8N3V7 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
SYNPOQ8N3V7 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SYNPOQ8N3V7 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.92□□□□□ -0.02
SYNPOQ8N3V7 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC14.92□□□□□ -0.02
SYNPOQ8N3V7 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
SYNPOQ8N3V7 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SYNPOQ8N3V7 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SYNPOQ8N3V7 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SYNPOQ8N3V7 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.91□□□□□ -0.02
SYNPOQ8N3V7 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
SYNPOQ8N3V7 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SYNPOQ8N3V7 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
SYNPOQ8N3V7 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SYNPOQ8N3V7 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SYNPOQ8N3V7 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC14.91□□□□□ -0.02
SYNPOQ8N3V7 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SYNPOQ8N3V7 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SYNPOQ8N3V7 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC14.91□□□□□ -0.02
SYNPOQ8N3V7 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SYNPOQ8N3V7 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SYNPOQ8N3V7 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.91□□□□□ -0.02
SYNPOQ8N3V7 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SYNPOQ8N3V7 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SYNPOQ8N3V7 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
SYNPOQ8N3V7 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
SYNPOQ8N3V7 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SYNPOQ8N3V7 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC14.91□□□□□ -0.02
SYNPOQ8N3V7 AL583805.1-201ENST00000391389 531 ntBASIC14.91□□□□□ -0.02
SYNPOQ8N3V7 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SYNPOQ8N3V7 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
SYNPOQ8N3V7 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC14.91□□□□□ -0.02
SYNPOQ8N3V7 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SYNPOQ8N3V7 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC14.91□□□□□ -0.02
SYNPOQ8N3V7 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
SYNPOQ8N3V7 TSPY25P-201ENST00000429463 745 ntBASIC14.91□□□□□ -0.02
SYNPOQ8N3V7 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC14.91□□□□□ -0.02
SYNPOQ8N3V7 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC14.91□□□□□ -0.02
SYNPOQ8N3V7 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC14.91□□□□□ -0.02
SYNPOQ8N3V7 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC14.91□□□□□ -0.02
SYNPOQ8N3V7 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC14.91□□□□□ -0.02
SYNPOQ8N3V7 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC14.91□□□□□ -0.02
SYNPOQ8N3V7 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC14.91□□□□□ -0.02
SYNPOQ8N3V7 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SYNPOQ8N3V7 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SYNPOQ8N3V7 MVK-217ENST00000639206 367 ntTSL 5 BASIC14.91□□□□□ -0.02
SYNPOQ8N3V7 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC14.91□□□□□ -0.02
SYNPOQ8N3V7 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
SYNPOQ8N3V7 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SYNPOQ8N3V7 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SYNPOQ8N3V7 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC14.91□□□□□ -0.02
SYNPOQ8N3V7 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
SYNPOQ8N3V7 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SYNPOQ8N3V7 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SYNPOQ8N3V7 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SYNPOQ8N3V7 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SYNPOQ8N3V7 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SYNPOQ8N3V7 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SYNPOQ8N3V7 AC126365.1-201ENST00000578585 1514 ntBASIC14.91□□□□□ -0.02
SYNPOQ8N3V7 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
SYNPOQ8N3V7 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SYNPOQ8N3V7 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SYNPOQ8N3V7 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SYNPOQ8N3V7 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SYNPOQ8N3V7 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
SYNPOQ8N3V7 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms