Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LYSMD2Q8IV50 STAT3-203ENST00000404395 2633 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LYSMD2Q8IV50 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC12.95□□□□□ -0.34
LYSMD2Q8IV50 SRSF1-205ENST00000582730 3117 ntTSL 2 BASIC12.95□□□□□ -0.34
LYSMD2Q8IV50 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LYSMD2Q8IV50 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
LYSMD2Q8IV50 AC115284.2-201ENST00000624646 2054 ntBASIC12.95□□□□□ -0.34
LYSMD2Q8IV50 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC12.95□□□□□ -0.34
LYSMD2Q8IV50 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC12.95□□□□□ -0.34
LYSMD2Q8IV50 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
LYSMD2Q8IV50 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
LYSMD2Q8IV50 SAP30BP-225ENST00000584667 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LYSMD2Q8IV50 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LYSMD2Q8IV50 KLF7-204ENST00000423015 1788 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LYSMD2Q8IV50 LEPROTL1-201ENST00000321250 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LYSMD2Q8IV50 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
LYSMD2Q8IV50 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LYSMD2Q8IV50 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC12.95□□□□□ -0.34
LYSMD2Q8IV50 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC12.95□□□□□ -0.34
LYSMD2Q8IV50 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LYSMD2Q8IV50 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC12.95□□□□□ -0.34
LYSMD2Q8IV50 C2-209ENST00000452323 1999 ntTSL 2 BASIC12.95□□□□□ -0.34
LYSMD2Q8IV50 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LYSMD2Q8IV50 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LYSMD2Q8IV50 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LYSMD2Q8IV50 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LYSMD2Q8IV50 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC12.95□□□□□ -0.34
LYSMD2Q8IV50 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC12.95□□□□□ -0.34
LYSMD2Q8IV50 PFN2-205ENST00000461868 613 ntTSL 2 BASIC12.95□□□□□ -0.34
LYSMD2Q8IV50 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC12.95□□□□□ -0.34
LYSMD2Q8IV50 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC12.95□□□□□ -0.34
LYSMD2Q8IV50 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LYSMD2Q8IV50 AC034105.1-201ENST00000563488 319 ntBASIC12.95□□□□□ -0.34
LYSMD2Q8IV50 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC12.95□□□□□ -0.34
LYSMD2Q8IV50 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC12.95□□□□□ -0.34
LYSMD2Q8IV50 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC12.95□□□□□ -0.34
LYSMD2Q8IV50 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
LYSMD2Q8IV50 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LYSMD2Q8IV50 PER1-202ENST00000354903 3115 ntTSL 2 BASIC12.95□□□□□ -0.34
LYSMD2Q8IV50 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LYSMD2Q8IV50 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC12.95□□□□□ -0.34
LYSMD2Q8IV50 HPD-204ENST00000543163 1709 ntTSL 5 BASIC12.95□□□□□ -0.34
LYSMD2Q8IV50 CDK5RAP1-203ENST00000357886 2164 ntTSL 5 BASIC12.95□□□□□ -0.34
LYSMD2Q8IV50 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LYSMD2Q8IV50 SH3TC1-201ENST00000245105 4226 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
LYSMD2Q8IV50 DCAF13-201ENST00000297579 2642 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LYSMD2Q8IV50 AMDHD2-202ENST00000302956 3273 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LYSMD2Q8IV50 TRIM3-203ENST00000525074 3044 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
LYSMD2Q8IV50 ANGPTL2-201ENST00000373417 2575 ntTSL 2 BASIC12.95□□□□□ -0.34
LYSMD2Q8IV50 ZNF799-202ENST00000430385 2583 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
LYSMD2Q8IV50 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LYSMD2Q8IV50 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC12.95□□□□□ -0.34
LYSMD2Q8IV50 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LYSMD2Q8IV50 TRMT61A-202ENST00000389749 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LYSMD2Q8IV50 CPT1C-204ENST00000405931 2785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
LYSMD2Q8IV50 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
LYSMD2Q8IV50 LINC02015-202ENST00000436078 2957 ntTSL 2 BASIC12.95□□□□□ -0.34
LYSMD2Q8IV50 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
LYSMD2Q8IV50 ACO2-201ENST00000216254 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LYSMD2Q8IV50 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LYSMD2Q8IV50 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LYSMD2Q8IV50 DLGAP3-201ENST00000235180 3587 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
LYSMD2Q8IV50 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
LYSMD2Q8IV50 PCDHA5-203ENST00000614258 4248 ntBASIC12.95□□□□□ -0.34
LYSMD2Q8IV50 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
LYSMD2Q8IV50 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LYSMD2Q8IV50 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
LYSMD2Q8IV50 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC12.94□□□□□ -0.34
LYSMD2Q8IV50 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC12.94□□□□□ -0.34
LYSMD2Q8IV50 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LYSMD2Q8IV50 WTH3DI-201ENST00000623617 3032 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
LYSMD2Q8IV50 NLRP2-204ENST00000391721 3420 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
LYSMD2Q8IV50 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LYSMD2Q8IV50 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
LYSMD2Q8IV50 FAM76A-204ENST00000373954 3567 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
LYSMD2Q8IV50 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LYSMD2Q8IV50 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LYSMD2Q8IV50 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LYSMD2Q8IV50 VHL-201ENST00000256474 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LYSMD2Q8IV50 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LYSMD2Q8IV50 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
LYSMD2Q8IV50 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC12.94□□□□□ -0.34
LYSMD2Q8IV50 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
LYSMD2Q8IV50 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
LYSMD2Q8IV50 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
LYSMD2Q8IV50 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
LYSMD2Q8IV50 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LYSMD2Q8IV50 PTMS-202ENST00000389462 773 ntTSL 2 BASIC12.94□□□□□ -0.34
LYSMD2Q8IV50 AL391647.1-201ENST00000395664 511 ntBASIC12.94□□□□□ -0.34
LYSMD2Q8IV50 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC12.94□□□□□ -0.34
LYSMD2Q8IV50 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
LYSMD2Q8IV50 SPCS2P4-201ENST00000436160 681 ntBASIC12.94□□□□□ -0.34
LYSMD2Q8IV50 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
LYSMD2Q8IV50 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
LYSMD2Q8IV50 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LYSMD2Q8IV50 FAM86C2P-203ENST00000528684 1004 ntBASIC12.94□□□□□ -0.34
LYSMD2Q8IV50 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC12.94□□□□□ -0.34
LYSMD2Q8IV50 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC12.94□□□□□ -0.34
LYSMD2Q8IV50 IGHV3OR16-6-201ENST00000568775 360 ntBASIC12.94□□□□□ -0.34
LYSMD2Q8IV50 AC015910.1-201ENST00000579400 975 ntBASIC12.94□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms