Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 LRRC3-AS1-201ENST00000426578 784 ntTSL 3 BASIC18.07■□□□□ 0.48
COL23A1Q86Y22 AC104961.1-201ENST00000427605 771 ntBASIC18.07■□□□□ 0.48
COL23A1Q86Y22 AC107464.2-201ENST00000502923 569 ntTSL 2 BASIC18.07■□□□□ 0.48
COL23A1Q86Y22 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC18.07■□□□□ 0.48
COL23A1Q86Y22 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
COL23A1Q86Y22 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
COL23A1Q86Y22 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
COL23A1Q86Y22 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
COL23A1Q86Y22 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
COL23A1Q86Y22 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
COL23A1Q86Y22 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
COL23A1Q86Y22 F10-201ENST00000375551 1509 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
COL23A1Q86Y22 WARS-232ENST00000556645 2508 ntTSL 5 BASIC18.07■□□□□ 0.48
COL23A1Q86Y22 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
COL23A1Q86Y22 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
COL23A1Q86Y22 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
COL23A1Q86Y22 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
COL23A1Q86Y22 AADAT-206ENST00000509167 2113 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
COL23A1Q86Y22 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
COL23A1Q86Y22 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
COL23A1Q86Y22 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
COL23A1Q86Y22 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
COL23A1Q86Y22 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
COL23A1Q86Y22 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC18.06■□□□□ 0.48
COL23A1Q86Y22 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
COL23A1Q86Y22 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
COL23A1Q86Y22 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
COL23A1Q86Y22 WASH7P-201ENST00000488147 1351 ntBASIC18.06■□□□□ 0.48
COL23A1Q86Y22 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
COL23A1Q86Y22 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
COL23A1Q86Y22 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
COL23A1Q86Y22 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC18.06■□□□□ 0.48
COL23A1Q86Y22 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
COL23A1Q86Y22 AC006987.1-201ENST00000413610 527 ntBASIC18.06■□□□□ 0.48
COL23A1Q86Y22 AC092896.1-201ENST00000465850 380 ntBASIC18.06■□□□□ 0.48
COL23A1Q86Y22 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC18.06■□□□□ 0.48
COL23A1Q86Y22 AC005740.1-201ENST00000515639 522 ntBASIC18.06■□□□□ 0.48
COL23A1Q86Y22 EXTL3-AS1-203ENST00000520023 780 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
COL23A1Q86Y22 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
COL23A1Q86Y22 FBXO36P1-201ENST00000579006 471 ntBASIC18.06■□□□□ 0.48
COL23A1Q86Y22 SCGB1B2P-201ENST00000595013 612 ntTSL 2 BASIC18.06■□□□□ 0.48
COL23A1Q86Y22 LINC01082-201ENST00000601250 441 ntTSL 2 BASIC18.06■□□□□ 0.48
COL23A1Q86Y22 ANKRD36C-208ENST00000619511 737 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
COL23A1Q86Y22 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC18.06■□□□□ 0.48
COL23A1Q86Y22 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC18.06■□□□□ 0.48
COL23A1Q86Y22 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC18.06■□□□□ 0.48
COL23A1Q86Y22 AL365181.1-201ENST00000564032 1828 ntBASIC18.06■□□□□ 0.48
COL23A1Q86Y22 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
COL23A1Q86Y22 COQ4-201ENST00000300452 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
COL23A1Q86Y22 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
COL23A1Q86Y22 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
COL23A1Q86Y22 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
COL23A1Q86Y22 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
COL23A1Q86Y22 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
COL23A1Q86Y22 FCRL6-202ENST00000339348 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
COL23A1Q86Y22 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
COL23A1Q86Y22 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
COL23A1Q86Y22 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
COL23A1Q86Y22 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
COL23A1Q86Y22 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC18.05■□□□□ 0.48
COL23A1Q86Y22 AC020658.6-201ENST00000623564 1870 ntBASIC18.05■□□□□ 0.48
COL23A1Q86Y22 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
COL23A1Q86Y22 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC18.05■□□□□ 0.48
COL23A1Q86Y22 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC18.05■□□□□ 0.48
COL23A1Q86Y22 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
COL23A1Q86Y22 DOC2GP-204ENST00000639052 2548 ntBASIC18.05■□□□□ 0.48
COL23A1Q86Y22 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
COL23A1Q86Y22 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
COL23A1Q86Y22 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
COL23A1Q86Y22 JPT1-202ENST00000356033 1519 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
COL23A1Q86Y22 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
COL23A1Q86Y22 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC18.05■□□□□ 0.48
COL23A1Q86Y22 SNX15-201ENST00000352068 771 ntTSL 5 BASIC18.05■□□□□ 0.48
COL23A1Q86Y22 PLA2G2A-202ENST00000400520 974 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
COL23A1Q86Y22 COLEC11-204ENST00000402794 1134 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
COL23A1Q86Y22 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC18.05■□□□□ 0.48
COL23A1Q86Y22 AC027612.2-202ENST00000445955 1199 ntBASIC18.05■□□□□ 0.48
COL23A1Q86Y22 TMEM14B-208ENST00000467317 1224 ntTSL 2 BASIC18.05■□□□□ 0.48
COL23A1Q86Y22 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
COL23A1Q86Y22 RN7SL147P-201ENST00000487345 298 ntBASIC18.05■□□□□ 0.48
COL23A1Q86Y22 EIF5A2-205ENST00000487522 565 ntTSL 3 BASIC18.05■□□□□ 0.48
COL23A1Q86Y22 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
COL23A1Q86Y22 PMEL-214ENST00000550447 901 ntTSL 3 BASIC18.05■□□□□ 0.48
COL23A1Q86Y22 HNRNPA1P5-201ENST00000558213 966 ntBASIC18.05■□□□□ 0.48
COL23A1Q86Y22 HNRNPA1P16-201ENST00000575692 955 ntBASIC18.05■□□□□ 0.48
COL23A1Q86Y22 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC18.05■□□□□ 0.48
COL23A1Q86Y22 AL135936.1-201ENST00000617956 998 ntTSL 5 BASIC18.05■□□□□ 0.48
COL23A1Q86Y22 AC110057.1-201ENST00000636031 898 ntBASIC18.05■□□□□ 0.48
COL23A1Q86Y22 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
COL23A1Q86Y22 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC18.05■□□□□ 0.48
COL23A1Q86Y22 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
COL23A1Q86Y22 HTR3D-201ENST00000334128 1459 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
COL23A1Q86Y22 LAP3P2-201ENST00000454686 1454 ntBASIC18.05■□□□□ 0.48
COL23A1Q86Y22 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
COL23A1Q86Y22 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
COL23A1Q86Y22 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC18.05■□□□□ 0.48
COL23A1Q86Y22 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
COL23A1Q86Y22 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
COL23A1Q86Y22 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC18.05■□□□□ 0.48
COL23A1Q86Y22 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms