Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC13.71□□□□□ -0.21
TUBA1AQ71U36 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TUBA1AQ71U36 AC093004.1-201ENST00000508850 424 ntBASIC13.71□□□□□ -0.21
TUBA1AQ71U36 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC13.71□□□□□ -0.21
TUBA1AQ71U36 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC13.71□□□□□ -0.21
TUBA1AQ71U36 CMC2-214ENST00000565925 640 ntTSL 5 BASIC13.71□□□□□ -0.21
TUBA1AQ71U36 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC13.71□□□□□ -0.21
TUBA1AQ71U36 AC007431.3-201ENST00000623221 587 ntBASIC13.71□□□□□ -0.21
TUBA1AQ71U36 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
TUBA1AQ71U36 CLK3P2-201ENST00000427566 1453 ntBASIC13.71□□□□□ -0.21
TUBA1AQ71U36 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TUBA1AQ71U36 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TUBA1AQ71U36 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
TUBA1AQ71U36 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
TUBA1AQ71U36 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
TUBA1AQ71U36 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
TUBA1AQ71U36 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.22
TUBA1AQ71U36 AMT-221ENST00000538581 2038 ntTSL 2 BASIC13.71□□□□□ -0.22
TUBA1AQ71U36 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.22
TUBA1AQ71U36 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
TUBA1AQ71U36 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
TUBA1AQ71U36 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC13.71□□□□□ -0.22
TUBA1AQ71U36 RERG-209ENST00000546331 1383 ntTSL 2 BASIC13.71□□□□□ -0.22
TUBA1AQ71U36 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC13.71□□□□□ -0.22
TUBA1AQ71U36 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
TUBA1AQ71U36 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC13.7□□□□□ -0.22
TUBA1AQ71U36 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC13.7□□□□□ -0.22
TUBA1AQ71U36 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TUBA1AQ71U36 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
TUBA1AQ71U36 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TUBA1AQ71U36 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TUBA1AQ71U36 NIN-202ENST00000324330 4364 ntTSL 5 BASIC13.7□□□□□ -0.22
TUBA1AQ71U36 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TUBA1AQ71U36 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TUBA1AQ71U36 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TUBA1AQ71U36 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
TUBA1AQ71U36 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TUBA1AQ71U36 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TUBA1AQ71U36 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
TUBA1AQ71U36 DENND3-221ENST00000523308 2959 ntTSL 2 BASIC13.7□□□□□ -0.22
TUBA1AQ71U36 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TUBA1AQ71U36 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC13.7□□□□□ -0.22
TUBA1AQ71U36 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
TUBA1AQ71U36 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TUBA1AQ71U36 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC13.7□□□□□ -0.22
TUBA1AQ71U36 CRB3P1-201ENST00000449338 276 ntBASIC13.7□□□□□ -0.22
TUBA1AQ71U36 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC13.7□□□□□ -0.22
TUBA1AQ71U36 AC055876.2-201ENST00000531834 546 ntBASIC13.7□□□□□ -0.22
TUBA1AQ71U36 API5-211ENST00000534695 560 ntTSL 5 BASIC13.7□□□□□ -0.22
TUBA1AQ71U36 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC13.7□□□□□ -0.22
TUBA1AQ71U36 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC13.7□□□□□ -0.22
TUBA1AQ71U36 WASH4P-201ENST00000564273 1246 ntBASIC13.7□□□□□ -0.22
TUBA1AQ71U36 AC008494.3-201ENST00000606615 944 ntBASIC13.7□□□□□ -0.22
TUBA1AQ71U36 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC13.7□□□□□ -0.22
TUBA1AQ71U36 BAIAP2-202ENST00000321300 2879 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
TUBA1AQ71U36 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TUBA1AQ71U36 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TUBA1AQ71U36 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TUBA1AQ71U36 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
TUBA1AQ71U36 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC13.7□□□□□ -0.22
TUBA1AQ71U36 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
TUBA1AQ71U36 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TUBA1AQ71U36 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC13.7□□□□□ -0.22
TUBA1AQ71U36 TRPA1-201ENST00000262209 5223 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TUBA1AQ71U36 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
TUBA1AQ71U36 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
TUBA1AQ71U36 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC13.7□□□□□ -0.22
TUBA1AQ71U36 C2-206ENST00000442278 2434 ntTSL 2 BASIC13.7□□□□□ -0.22
TUBA1AQ71U36 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TUBA1AQ71U36 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TUBA1AQ71U36 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC13.7□□□□□ -0.22
TUBA1AQ71U36 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC13.7□□□□□ -0.22
TUBA1AQ71U36 SLC7A15P-201ENST00000424028 1363 ntBASIC13.7□□□□□ -0.22
TUBA1AQ71U36 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TUBA1AQ71U36 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TUBA1AQ71U36 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TUBA1AQ71U36 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TUBA1AQ71U36 AL121723.1-201ENST00000445194 1519 ntBASIC13.69□□□□□ -0.22
TUBA1AQ71U36 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TUBA1AQ71U36 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TUBA1AQ71U36 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TUBA1AQ71U36 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TUBA1AQ71U36 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC13.69□□□□□ -0.22
TUBA1AQ71U36 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TUBA1AQ71U36 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
TUBA1AQ71U36 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
TUBA1AQ71U36 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
TUBA1AQ71U36 AC012508.2-201ENST00000567613 1472 ntBASIC13.69□□□□□ -0.22
TUBA1AQ71U36 LINC01749-202ENST00000607802 3408 ntTSL 2 BASIC13.69□□□□□ -0.22
TUBA1AQ71U36 KCNIP3-201ENST00000295225 2940 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TUBA1AQ71U36 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TUBA1AQ71U36 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TUBA1AQ71U36 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC13.69□□□□□ -0.22
TUBA1AQ71U36 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC13.69□□□□□ -0.22
TUBA1AQ71U36 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TUBA1AQ71U36 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TUBA1AQ71U36 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TUBA1AQ71U36 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
TUBA1AQ71U36 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
TUBA1AQ71U36 TFIP11-201ENST00000405938 2896 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms