Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC18.13■□□□□ 0.49
RC3H1Q5TC82 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
RC3H1Q5TC82 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
RC3H1Q5TC82 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RC3H1Q5TC82 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RC3H1Q5TC82 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RC3H1Q5TC82 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RC3H1Q5TC82 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RC3H1Q5TC82 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
RC3H1Q5TC82 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RC3H1Q5TC82 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC18.12■□□□□ 0.49
RC3H1Q5TC82 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC18.12■□□□□ 0.49
RC3H1Q5TC82 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC18.12■□□□□ 0.49
RC3H1Q5TC82 ALG1L3P-201ENST00000503331 765 ntBASIC18.12■□□□□ 0.49
RC3H1Q5TC82 CHCHD2P2-201ENST00000503744 321 ntBASIC18.12■□□□□ 0.49
RC3H1Q5TC82 AC113391.2-201ENST00000512245 553 ntTSL 4 BASIC18.12■□□□□ 0.49
RC3H1Q5TC82 AL162632.1-201ENST00000546784 548 ntTSL 4 BASIC18.12■□□□□ 0.49
RC3H1Q5TC82 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC18.12■□□□□ 0.49
RC3H1Q5TC82 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC18.12■□□□□ 0.49
RC3H1Q5TC82 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RC3H1Q5TC82 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC18.12■□□□□ 0.49
RC3H1Q5TC82 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC18.12■□□□□ 0.49
RC3H1Q5TC82 AL139339.2-201ENST00000608063 657 ntBASIC18.12■□□□□ 0.49
RC3H1Q5TC82 APOBEC3H-207ENST00000613996 465 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RC3H1Q5TC82 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC18.12■□□□□ 0.49
RC3H1Q5TC82 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
RC3H1Q5TC82 SGCA-201ENST00000262018 1432 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RC3H1Q5TC82 KRT8P18-201ENST00000413425 1445 ntBASIC18.12■□□□□ 0.49
RC3H1Q5TC82 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC18.12■□□□□ 0.49
RC3H1Q5TC82 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC18.12■□□□□ 0.49
RC3H1Q5TC82 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC18.12■□□□□ 0.49
RC3H1Q5TC82 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RC3H1Q5TC82 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
RC3H1Q5TC82 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC18.12■□□□□ 0.49
RC3H1Q5TC82 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
RC3H1Q5TC82 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RC3H1Q5TC82 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RC3H1Q5TC82 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC18.11■□□□□ 0.49
RC3H1Q5TC82 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RC3H1Q5TC82 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
RC3H1Q5TC82 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RC3H1Q5TC82 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RC3H1Q5TC82 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
RC3H1Q5TC82 ANG-202ENST00000397990 742 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RC3H1Q5TC82 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC18.11■□□□□ 0.49
RC3H1Q5TC82 VENTXP4-201ENST00000449029 958 ntBASIC18.11■□□□□ 0.49
RC3H1Q5TC82 LINC00892-203ENST00000454385 686 ntTSL 3 BASIC18.11■□□□□ 0.49
RC3H1Q5TC82 TAGLN3-203ENST00000455401 1164 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RC3H1Q5TC82 PRSS3P1-201ENST00000503996 742 ntBASIC18.11■□□□□ 0.49
RC3H1Q5TC82 CYB561A3-208ENST00000536915 1094 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
RC3H1Q5TC82 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC18.11■□□□□ 0.49
RC3H1Q5TC82 SRP14-204ENST00000558720 780 ntTSL 2 BASIC18.11■□□□□ 0.49
RC3H1Q5TC82 AC148477.9-201ENST00000623974 539 ntBASIC18.11■□□□□ 0.49
RC3H1Q5TC82 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC18.11■□□□□ 0.49
RC3H1Q5TC82 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RC3H1Q5TC82 PHB-210ENST00000511832 1509 ntTSL 2 BASIC18.11■□□□□ 0.49
RC3H1Q5TC82 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC18.11■□□□□ 0.49
RC3H1Q5TC82 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RC3H1Q5TC82 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC18.11■□□□□ 0.49
RC3H1Q5TC82 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
RC3H1Q5TC82 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC18.11■□□□□ 0.49
RC3H1Q5TC82 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RC3H1Q5TC82 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC18.11■□□□□ 0.49
RC3H1Q5TC82 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RC3H1Q5TC82 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RC3H1Q5TC82 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RC3H1Q5TC82 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RC3H1Q5TC82 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RC3H1Q5TC82 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
RC3H1Q5TC82 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RC3H1Q5TC82 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RC3H1Q5TC82 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC18.1■□□□□ 0.49
RC3H1Q5TC82 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC18.1■□□□□ 0.49
RC3H1Q5TC82 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RC3H1Q5TC82 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RC3H1Q5TC82 PDXDC2P-206ENST00000534700 1315 ntBASIC18.1■□□□□ 0.49
RC3H1Q5TC82 DHRS7-209ENST00000557185 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RC3H1Q5TC82 AC064801.2-201ENST00000625052 1303 ntBASIC18.1■□□□□ 0.49
RC3H1Q5TC82 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RC3H1Q5TC82 OR7E115P-201ENST00000382617 1024 ntBASIC18.1■□□□□ 0.49
RC3H1Q5TC82 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC18.1■□□□□ 0.49
RC3H1Q5TC82 AL451105.2-201ENST00000413763 1234 ntTSL 5 BASIC18.1■□□□□ 0.49
RC3H1Q5TC82 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC18.1■□□□□ 0.49
RC3H1Q5TC82 HLA-DPA2-205ENST00000433582 733 ntBASIC18.1■□□□□ 0.49
RC3H1Q5TC82 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC18.1■□□□□ 0.49
RC3H1Q5TC82 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC18.1■□□□□ 0.49
RC3H1Q5TC82 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
RC3H1Q5TC82 VENTXP3-201ENST00000546480 773 ntBASIC18.1■□□□□ 0.49
RC3H1Q5TC82 AC130456.3-201ENST00000561762 633 ntTSL 3 BASIC18.1■□□□□ 0.49
RC3H1Q5TC82 AP001029.1-201ENST00000589843 168 ntTSL 3 BASIC18.1■□□□□ 0.49
RC3H1Q5TC82 HPX-213ENST00000615166 826 ntTSL 5 BASIC18.1■□□□□ 0.49
RC3H1Q5TC82 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
RC3H1Q5TC82 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RC3H1Q5TC82 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
RC3H1Q5TC82 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
RC3H1Q5TC82 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC18.1■□□□□ 0.49
RC3H1Q5TC82 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RC3H1Q5TC82 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
RC3H1Q5TC82 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
RC3H1Q5TC82 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms