Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 MBLAC2-202ENST00000514906 1936 ntBASIC17.1■□□□□ 0.33
CCDC144BQ3MJ40 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CCDC144BQ3MJ40 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC144BQ3MJ40 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC144BQ3MJ40 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC144BQ3MJ40 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC144BQ3MJ40 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC144BQ3MJ40 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC144BQ3MJ40 SDCCAG3P2-201ENST00000326105 1023 ntBASIC17.1■□□□□ 0.33
CCDC144BQ3MJ40 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC144BQ3MJ40 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC17.1■□□□□ 0.33
CCDC144BQ3MJ40 HLA-K-203ENST00000430151 1046 ntBASIC17.1■□□□□ 0.33
CCDC144BQ3MJ40 SPTLC1P5-201ENST00000450718 252 ntBASIC17.1■□□□□ 0.33
CCDC144BQ3MJ40 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC17.1■□□□□ 0.33
CCDC144BQ3MJ40 RN7SL769P-201ENST00000469386 295 ntBASIC17.1■□□□□ 0.33
CCDC144BQ3MJ40 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC144BQ3MJ40 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC144BQ3MJ40 FTLP10-202ENST00000505798 471 ntBASIC17.1■□□□□ 0.33
CCDC144BQ3MJ40 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC17.1■□□□□ 0.33
CCDC144BQ3MJ40 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC17.1■□□□□ 0.33
CCDC144BQ3MJ40 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC17.1■□□□□ 0.33
CCDC144BQ3MJ40 AC097724.1-201ENST00000609581 426 ntBASIC17.1■□□□□ 0.33
CCDC144BQ3MJ40 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC17.1■□□□□ 0.33
CCDC144BQ3MJ40 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC144BQ3MJ40 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC144BQ3MJ40 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
CCDC144BQ3MJ40 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC144BQ3MJ40 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
CCDC144BQ3MJ40 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC144BQ3MJ40 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC144BQ3MJ40 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC17.1■□□□□ 0.33
CCDC144BQ3MJ40 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC144BQ3MJ40 MPI-203ENST00000535694 1523 ntTSL 2 BASIC17.1■□□□□ 0.33
CCDC144BQ3MJ40 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC144BQ3MJ40 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC144BQ3MJ40 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
CCDC144BQ3MJ40 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC144BQ3MJ40 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC144BQ3MJ40 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC144BQ3MJ40 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CCDC144BQ3MJ40 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC144BQ3MJ40 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC144BQ3MJ40 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC144BQ3MJ40 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC144BQ3MJ40 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC144BQ3MJ40 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CCDC144BQ3MJ40 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC17.09■□□□□ 0.33
CCDC144BQ3MJ40 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC144BQ3MJ40 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC144BQ3MJ40 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC144BQ3MJ40 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC144BQ3MJ40 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC144BQ3MJ40 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC144BQ3MJ40 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC144BQ3MJ40 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC144BQ3MJ40 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
CCDC144BQ3MJ40 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CCDC144BQ3MJ40 MIR769-201ENST00000390225 118 ntBASIC17.09■□□□□ 0.33
CCDC144BQ3MJ40 AL136309.1-201ENST00000403917 691 ntBASIC17.09■□□□□ 0.33
CCDC144BQ3MJ40 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CCDC144BQ3MJ40 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC144BQ3MJ40 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC17.09■□□□□ 0.33
CCDC144BQ3MJ40 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC17.09■□□□□ 0.33
CCDC144BQ3MJ40 SDHD-202ENST00000525291 790 ntTSL 3 BASIC17.09■□□□□ 0.33
CCDC144BQ3MJ40 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC144BQ3MJ40 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC17.09■□□□□ 0.33
CCDC144BQ3MJ40 HCG18-245ENST00000602550 559 ntTSL 4 BASIC17.09■□□□□ 0.33
CCDC144BQ3MJ40 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC144BQ3MJ40 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC144BQ3MJ40 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC144BQ3MJ40 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC17.09■□□□□ 0.33
CCDC144BQ3MJ40 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC144BQ3MJ40 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC144BQ3MJ40 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
CCDC144BQ3MJ40 AC152010.1-201ENST00000415779 2006 ntBASIC17.09■□□□□ 0.33
CCDC144BQ3MJ40 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC144BQ3MJ40 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC144BQ3MJ40 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC144BQ3MJ40 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC144BQ3MJ40 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC144BQ3MJ40 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC144BQ3MJ40 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CCDC144BQ3MJ40 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
CCDC144BQ3MJ40 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
CCDC144BQ3MJ40 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC17.08■□□□□ 0.33
CCDC144BQ3MJ40 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CCDC144BQ3MJ40 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
CCDC144BQ3MJ40 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
CCDC144BQ3MJ40 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC17.08■□□□□ 0.33
CCDC144BQ3MJ40 AC005252.3-201ENST00000623855 2258 ntBASIC17.08■□□□□ 0.33
CCDC144BQ3MJ40 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC144BQ3MJ40 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC144BQ3MJ40 KRT8P19-201ENST00000551916 1455 ntBASIC17.08■□□□□ 0.32
CCDC144BQ3MJ40 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC144BQ3MJ40 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC144BQ3MJ40 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
CCDC144BQ3MJ40 RPL5P21-201ENST00000404620 815 ntBASIC17.08■□□□□ 0.32
CCDC144BQ3MJ40 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC144BQ3MJ40 IMP3P2-201ENST00000489760 475 ntBASIC17.08■□□□□ 0.32
CCDC144BQ3MJ40 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms