Protein–RNA interactions for Protein: Q05901

CHRNB3, Neuronal acetylcholine receptor subunit beta-3, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB3Q05901 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC14.03□□□□□ -0.16
CHRNB3Q05901 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC14.03□□□□□ -0.16
CHRNB3Q05901 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC14.03□□□□□ -0.16
CHRNB3Q05901 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC14.03□□□□□ -0.16
CHRNB3Q05901 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC14.03□□□□□ -0.16
CHRNB3Q05901 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CHRNB3Q05901 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC14.03□□□□□ -0.16
CHRNB3Q05901 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC14.03□□□□□ -0.16
CHRNB3Q05901 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC14.03□□□□□ -0.16
CHRNB3Q05901 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CHRNB3Q05901 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CHRNB3Q05901 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC14.03□□□□□ -0.16
CHRNB3Q05901 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC14.03□□□□□ -0.16
CHRNB3Q05901 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CHRNB3Q05901 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CHRNB3Q05901 AC092053.3-201ENST00000641308 4975 ntBASIC14.03□□□□□ -0.16
CHRNB3Q05901 RN7SL832P-201ENST00000607781 1756 ntBASIC14.03□□□□□ -0.16
CHRNB3Q05901 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CHRNB3Q05901 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC14.03□□□□□ -0.16
CHRNB3Q05901 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC14.03□□□□□ -0.16
CHRNB3Q05901 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CHRNB3Q05901 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CHRNB3Q05901 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CHRNB3Q05901 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC14.03□□□□□ -0.16
CHRNB3Q05901 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14.03□□□□□ -0.16
CHRNB3Q05901 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CHRNB3Q05901 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CHRNB3Q05901 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
CHRNB3Q05901 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC14.03□□□□□ -0.16
CHRNB3Q05901 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CHRNB3Q05901 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CHRNB3Q05901 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CHRNB3Q05901 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CHRNB3Q05901 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CHRNB3Q05901 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CHRNB3Q05901 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CHRNB3Q05901 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
CHRNB3Q05901 COL6A4P2-202ENST00000504443 2753 ntBASIC14.02□□□□□ -0.16
CHRNB3Q05901 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CHRNB3Q05901 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC14.02□□□□□ -0.16
CHRNB3Q05901 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CHRNB3Q05901 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
CHRNB3Q05901 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CHRNB3Q05901 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC14.02□□□□□ -0.16
CHRNB3Q05901 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
CHRNB3Q05901 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC14.02□□□□□ -0.16
CHRNB3Q05901 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC14.02□□□□□ -0.16
CHRNB3Q05901 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CHRNB3Q05901 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CHRNB3Q05901 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CHRNB3Q05901 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CHRNB3Q05901 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CHRNB3Q05901 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CHRNB3Q05901 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
CHRNB3Q05901 HLA-K-203ENST00000430151 1046 ntBASIC14.02□□□□□ -0.17
CHRNB3Q05901 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
CHRNB3Q05901 TSPY16P-201ENST00000449843 468 ntBASIC14.02□□□□□ -0.17
CHRNB3Q05901 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC14.02□□□□□ -0.17
CHRNB3Q05901 TERF1P3-201ENST00000505638 1227 ntBASIC14.02□□□□□ -0.17
CHRNB3Q05901 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC14.02□□□□□ -0.17
CHRNB3Q05901 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC14.02□□□□□ -0.17
CHRNB3Q05901 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC14.02□□□□□ -0.17
CHRNB3Q05901 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
CHRNB3Q05901 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC14.02□□□□□ -0.17
CHRNB3Q05901 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CHRNB3Q05901 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC14.02□□□□□ -0.17
CHRNB3Q05901 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
CHRNB3Q05901 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC14.02□□□□□ -0.17
CHRNB3Q05901 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CHRNB3Q05901 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CHRNB3Q05901 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CHRNB3Q05901 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CHRNB3Q05901 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CHRNB3Q05901 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC14.02□□□□□ -0.17
CHRNB3Q05901 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC14.02□□□□□ -0.17
CHRNB3Q05901 AC027612.1-201ENST00000445234 2395 ntBASIC14.02□□□□□ -0.17
CHRNB3Q05901 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CHRNB3Q05901 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
CHRNB3Q05901 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CHRNB3Q05901 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CHRNB3Q05901 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CHRNB3Q05901 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC14.02□□□□□ -0.17
CHRNB3Q05901 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CHRNB3Q05901 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CHRNB3Q05901 MEX3B-202ENST00000558133 4333 ntBASIC14.01□□□□□ -0.17
CHRNB3Q05901 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
CHRNB3Q05901 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC14.01□□□□□ -0.17
CHRNB3Q05901 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC14.01□□□□□ -0.17
CHRNB3Q05901 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC14.01□□□□□ -0.17
CHRNB3Q05901 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CHRNB3Q05901 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CHRNB3Q05901 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC14.01□□□□□ -0.17
CHRNB3Q05901 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CHRNB3Q05901 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC14.01□□□□□ -0.17
CHRNB3Q05901 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CHRNB3Q05901 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
CHRNB3Q05901 WARS-203ENST00000358655 2466 ntTSL 2 BASIC14.01□□□□□ -0.17
CHRNB3Q05901 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CHRNB3Q05901 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CHRNB3Q05901 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms