Protein–RNA interactions for Protein: Q02410

APBA1, Amyloid-beta A4 precursor protein-binding family A member 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APBA1Q02410 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
APBA1Q02410 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
APBA1Q02410 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
APBA1Q02410 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
APBA1Q02410 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
APBA1Q02410 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
APBA1Q02410 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
APBA1Q02410 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC16.06■□□□□ 0.16
APBA1Q02410 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
APBA1Q02410 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC16.06■□□□□ 0.16
APBA1Q02410 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
APBA1Q02410 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
APBA1Q02410 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC16.06■□□□□ 0.16
APBA1Q02410 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
APBA1Q02410 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
APBA1Q02410 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
APBA1Q02410 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
APBA1Q02410 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
APBA1Q02410 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC16.05■□□□□ 0.16
APBA1Q02410 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC16.05■□□□□ 0.16
APBA1Q02410 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
APBA1Q02410 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
APBA1Q02410 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
APBA1Q02410 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
APBA1Q02410 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
APBA1Q02410 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
APBA1Q02410 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
APBA1Q02410 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
APBA1Q02410 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC16.05■□□□□ 0.16
APBA1Q02410 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC16.05■□□□□ 0.16
APBA1Q02410 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
APBA1Q02410 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
APBA1Q02410 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
APBA1Q02410 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
APBA1Q02410 CALY-203ENST00000368558 825 ntTSL 5 BASIC16.05■□□□□ 0.16
APBA1Q02410 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
APBA1Q02410 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
APBA1Q02410 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
APBA1Q02410 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC16.05■□□□□ 0.16
APBA1Q02410 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
APBA1Q02410 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC16.05■□□□□ 0.16
APBA1Q02410 RN7SL752P-201ENST00000463779 287 ntBASIC16.05■□□□□ 0.16
APBA1Q02410 LHX6-205ENST00000464484 666 ntTSL 2 BASIC16.05■□□□□ 0.16
APBA1Q02410 MESTP3-201ENST00000503460 968 ntBASIC16.05■□□□□ 0.16
APBA1Q02410 GCOM2-201ENST00000509133 1104 ntBASIC16.05■□□□□ 0.16
APBA1Q02410 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
APBA1Q02410 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC16.05■□□□□ 0.16
APBA1Q02410 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC16.05■□□□□ 0.16
APBA1Q02410 PTP4A1P2-201ENST00000546033 454 ntBASIC16.05■□□□□ 0.16
APBA1Q02410 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC16.05■□□□□ 0.16
APBA1Q02410 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC16.05■□□□□ 0.16
APBA1Q02410 ETV2-208ENST00000621247 941 ntTSL 5 BASIC16.05■□□□□ 0.16
APBA1Q02410 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC16.05■□□□□ 0.16
APBA1Q02410 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC16.05■□□□□ 0.16
APBA1Q02410 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
APBA1Q02410 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
APBA1Q02410 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
APBA1Q02410 AC016397.2-201ENST00000624848 1985 ntBASIC16.05■□□□□ 0.16
APBA1Q02410 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
APBA1Q02410 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
APBA1Q02410 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
APBA1Q02410 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
APBA1Q02410 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC16.05■□□□□ 0.16
APBA1Q02410 RN7SL832P-201ENST00000607781 1756 ntBASIC16.05■□□□□ 0.16
APBA1Q02410 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
APBA1Q02410 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
APBA1Q02410 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC16.05■□□□□ 0.16
APBA1Q02410 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
APBA1Q02410 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
APBA1Q02410 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
APBA1Q02410 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
APBA1Q02410 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
APBA1Q02410 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
APBA1Q02410 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
APBA1Q02410 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC16.04■□□□□ 0.16
APBA1Q02410 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
APBA1Q02410 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
APBA1Q02410 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
APBA1Q02410 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
APBA1Q02410 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC16.04■□□□□ 0.16
APBA1Q02410 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC16.04■□□□□ 0.16
APBA1Q02410 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
APBA1Q02410 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC16.04■□□□□ 0.16
APBA1Q02410 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
APBA1Q02410 FKBP4P6-201ENST00000457486 1332 ntBASIC16.04■□□□□ 0.16
APBA1Q02410 MRPL37P1-201ENST00000592451 1337 ntBASIC16.04■□□□□ 0.16
APBA1Q02410 CICP17-201ENST00000418553 2377 ntBASIC16.04■□□□□ 0.16
APBA1Q02410 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
APBA1Q02410 AC090505.1-201ENST00000430515 1834 ntBASIC16.04■□□□□ 0.16
APBA1Q02410 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
APBA1Q02410 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
APBA1Q02410 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
APBA1Q02410 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
APBA1Q02410 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC16.04■□□□□ 0.16
APBA1Q02410 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
APBA1Q02410 TLE1P1-201ENST00000422965 589 ntBASIC16.04■□□□□ 0.16
APBA1Q02410 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC16.04■□□□□ 0.16
APBA1Q02410 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC16.04■□□□□ 0.16
APBA1Q02410 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
APBA1Q02410 BCRP2-202ENST00000447763 634 ntBASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms