Protein–RNA interactions for Protein: P78348

ASIC1, Acid-sensing ion channel 1, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ASIC1P78348 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
ASIC1P78348 USP4-203ENST00000415188 1454 ntTSL 3 BASIC16.47■□□□□ 0.23
ASIC1P78348 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ASIC1P78348 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ASIC1P78348 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
ASIC1P78348 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
ASIC1P78348 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC16.47■□□□□ 0.23
ASIC1P78348 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC16.47■□□□□ 0.23
ASIC1P78348 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC16.47■□□□□ 0.23
ASIC1P78348 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC16.47■□□□□ 0.23
ASIC1P78348 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
ASIC1P78348 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ASIC1P78348 GSN-209ENST00000449733 2702 ntTSL 2 BASIC16.47■□□□□ 0.23
ASIC1P78348 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
ASIC1P78348 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC16.46■□□□□ 0.23
ASIC1P78348 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ASIC1P78348 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
ASIC1P78348 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
ASIC1P78348 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ASIC1P78348 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ASIC1P78348 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ASIC1P78348 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ASIC1P78348 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
ASIC1P78348 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
ASIC1P78348 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ASIC1P78348 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC16.46■□□□□ 0.23
ASIC1P78348 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ASIC1P78348 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
ASIC1P78348 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
ASIC1P78348 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC16.46■□□□□ 0.23
ASIC1P78348 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ASIC1P78348 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ASIC1P78348 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ASIC1P78348 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ASIC1P78348 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ASIC1P78348 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
ASIC1P78348 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC16.46■□□□□ 0.23
ASIC1P78348 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ASIC1P78348 AC004945.1-201ENST00000416738 983 ntBASIC16.46■□□□□ 0.23
ASIC1P78348 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC16.46■□□□□ 0.23
ASIC1P78348 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ASIC1P78348 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
ASIC1P78348 KRT43P-201ENST00000434019 910 ntBASIC16.46■□□□□ 0.23
ASIC1P78348 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
ASIC1P78348 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC16.46■□□□□ 0.23
ASIC1P78348 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC16.46■□□□□ 0.23
ASIC1P78348 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC16.46■□□□□ 0.23
ASIC1P78348 RPL28-206ENST00000558752 671 ntTSL 3 BASIC16.46■□□□□ 0.23
ASIC1P78348 AC103988.2-201ENST00000561804 725 ntBASIC16.46■□□□□ 0.23
ASIC1P78348 APRT-204ENST00000563655 709 ntTSL 5 BASIC16.46■□□□□ 0.23
ASIC1P78348 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC16.46■□□□□ 0.23
ASIC1P78348 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC16.46■□□□□ 0.23
ASIC1P78348 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC16.46■□□□□ 0.23
ASIC1P78348 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC16.46■□□□□ 0.23
ASIC1P78348 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC16.46■□□□□ 0.23
ASIC1P78348 AC090505.1-201ENST00000430515 1834 ntBASIC16.46■□□□□ 0.23
ASIC1P78348 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC16.46■□□□□ 0.23
ASIC1P78348 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ASIC1P78348 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ASIC1P78348 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ASIC1P78348 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC16.46■□□□□ 0.23
ASIC1P78348 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ASIC1P78348 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.22
ASIC1P78348 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
ASIC1P78348 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
ASIC1P78348 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ASIC1P78348 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
ASIC1P78348 AC136759.1-202ENST00000530858 2194 ntBASIC16.45■□□□□ 0.22
ASIC1P78348 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ASIC1P78348 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ASIC1P78348 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
ASIC1P78348 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
ASIC1P78348 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
ASIC1P78348 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
ASIC1P78348 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC16.45■□□□□ 0.22
ASIC1P78348 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ASIC1P78348 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ASIC1P78348 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
ASIC1P78348 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC16.45■□□□□ 0.22
ASIC1P78348 CNN2P8-201ENST00000421872 913 ntBASIC16.45■□□□□ 0.22
ASIC1P78348 PUDPP3-201ENST00000445368 636 ntBASIC16.45■□□□□ 0.22
ASIC1P78348 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
ASIC1P78348 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ASIC1P78348 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC16.45■□□□□ 0.22
ASIC1P78348 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ASIC1P78348 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC16.45■□□□□ 0.22
ASIC1P78348 ALG3P1-201ENST00000508806 1114 ntBASIC16.45■□□□□ 0.22
ASIC1P78348 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC16.45■□□□□ 0.22
ASIC1P78348 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC16.45■□□□□ 0.22
ASIC1P78348 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC16.45■□□□□ 0.22
ASIC1P78348 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC16.45■□□□□ 0.22
ASIC1P78348 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
ASIC1P78348 MIR4683-201ENST00000579659 81 ntBASIC16.45■□□□□ 0.22
ASIC1P78348 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC16.45■□□□□ 0.22
ASIC1P78348 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
ASIC1P78348 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ASIC1P78348 AC006453.4-201ENST00000636949 1252 ntBASIC16.45■□□□□ 0.22
ASIC1P78348 AC002472.3-201ENST00000640124 621 ntBASIC16.45■□□□□ 0.22
ASIC1P78348 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC16.45■□□□□ 0.22
ASIC1P78348 F10-203ENST00000409306 1450 ntTSL 3 BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms