Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
LMO4P61968 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
LMO4P61968 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC11.97□□□□□ -0.49
LMO4P61968 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
LMO4P61968 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
LMO4P61968 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
LMO4P61968 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
LMO4P61968 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
LMO4P61968 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
LMO4P61968 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
LMO4P61968 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
LMO4P61968 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
LMO4P61968 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
LMO4P61968 AC074138.1-201ENST00000611182 1303 ntBASIC11.97□□□□□ -0.49
LMO4P61968 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
LMO4P61968 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
LMO4P61968 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
LMO4P61968 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
LMO4P61968 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
LMO4P61968 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
LMO4P61968 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
LMO4P61968 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC11.97□□□□□ -0.49
LMO4P61968 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
LMO4P61968 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
LMO4P61968 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC11.97□□□□□ -0.49
LMO4P61968 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
LMO4P61968 AL807761.2-201ENST00000422849 729 ntBASIC11.97□□□□□ -0.49
LMO4P61968 AC092580.1-201ENST00000433998 658 ntBASIC11.97□□□□□ -0.49
LMO4P61968 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC11.97□□□□□ -0.49
LMO4P61968 NAGK-204ENST00000443872 878 ntTSL 3 BASIC11.97□□□□□ -0.49
LMO4P61968 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC11.97□□□□□ -0.49
LMO4P61968 RN7SL181P-201ENST00000462921 277 ntBASIC11.97□□□□□ -0.49
LMO4P61968 AC008267.1-201ENST00000474858 1069 ntBASIC11.97□□□□□ -0.49
LMO4P61968 AC130709.1-201ENST00000484779 1212 ntBASIC11.97□□□□□ -0.49
LMO4P61968 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC11.97□□□□□ -0.49
LMO4P61968 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
LMO4P61968 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
LMO4P61968 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC11.97□□□□□ -0.49
LMO4P61968 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC11.97□□□□□ -0.49
LMO4P61968 IQSEC3P1-201ENST00000538799 536 ntBASIC11.97□□□□□ -0.49
LMO4P61968 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
LMO4P61968 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
LMO4P61968 SORD2P-201ENST00000558556 1069 ntBASIC11.97□□□□□ -0.49
LMO4P61968 AC005586.2-201ENST00000563946 837 ntBASIC11.97□□□□□ -0.49
LMO4P61968 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC11.97□□□□□ -0.49
LMO4P61968 AC092171.5-201ENST00000608012 942 ntBASIC11.97□□□□□ -0.49
LMO4P61968 AC021016.3-201ENST00000608367 477 ntBASIC11.97□□□□□ -0.49
LMO4P61968 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC11.97□□□□□ -0.49
LMO4P61968 COX6A1P2-201ENST00000620597 330 ntBASIC11.97□□□□□ -0.49
LMO4P61968 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC11.97□□□□□ -0.49
LMO4P61968 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
LMO4P61968 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
LMO4P61968 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
LMO4P61968 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
LMO4P61968 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC11.97□□□□□ -0.49
LMO4P61968 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC11.97□□□□□ -0.49
LMO4P61968 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
LMO4P61968 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC11.97□□□□□ -0.49
LMO4P61968 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
LMO4P61968 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC11.97□□□□□ -0.49
LMO4P61968 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
LMO4P61968 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
LMO4P61968 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
LMO4P61968 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
LMO4P61968 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
LMO4P61968 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
LMO4P61968 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
LMO4P61968 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC11.97□□□□□ -0.49
LMO4P61968 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
LMO4P61968 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC11.97□□□□□ -0.49
LMO4P61968 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
LMO4P61968 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
LMO4P61968 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC11.97□□□□□ -0.49
LMO4P61968 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC11.97□□□□□ -0.49
LMO4P61968 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
LMO4P61968 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC11.97□□□□□ -0.49
LMO4P61968 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC11.97□□□□□ -0.49
LMO4P61968 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC11.96□□□□□ -0.49
LMO4P61968 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC11.96□□□□□ -0.49
LMO4P61968 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
LMO4P61968 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
LMO4P61968 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
LMO4P61968 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
LMO4P61968 AC104640.1-201ENST00000562617 2109 ntBASIC11.96□□□□□ -0.49
LMO4P61968 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
LMO4P61968 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
LMO4P61968 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
LMO4P61968 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
LMO4P61968 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.49
LMO4P61968 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
LMO4P61968 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
LMO4P61968 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
LMO4P61968 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
LMO4P61968 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
LMO4P61968 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC11.96□□□□□ -0.49
LMO4P61968 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC11.96□□□□□ -0.49
LMO4P61968 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
LMO4P61968 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
LMO4P61968 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
LMO4P61968 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms