Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC13.25□□□□□ -0.29
VBP1P61758 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
VBP1P61758 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
VBP1P61758 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
VBP1P61758 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
VBP1P61758 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
VBP1P61758 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
VBP1P61758 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
VBP1P61758 RPS2P28-201ENST00000314255 741 ntBASIC13.25□□□□□ -0.29
VBP1P61758 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC13.25□□□□□ -0.29
VBP1P61758 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
VBP1P61758 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
VBP1P61758 AC009947.1-201ENST00000444350 727 ntBASIC13.25□□□□□ -0.29
VBP1P61758 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC13.25□□□□□ -0.29
VBP1P61758 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
VBP1P61758 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC13.25□□□□□ -0.29
VBP1P61758 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC13.25□□□□□ -0.29
VBP1P61758 KRT19P2-202ENST00000557173 1012 ntBASIC13.25□□□□□ -0.29
VBP1P61758 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC13.25□□□□□ -0.29
VBP1P61758 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
VBP1P61758 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC13.25□□□□□ -0.29
VBP1P61758 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
VBP1P61758 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
VBP1P61758 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC13.25□□□□□ -0.29
VBP1P61758 NCS1-201ENST00000372398 4991 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
VBP1P61758 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
VBP1P61758 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
VBP1P61758 PPARGC1B-202ENST00000360453 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
VBP1P61758 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
VBP1P61758 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
VBP1P61758 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
VBP1P61758 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
VBP1P61758 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
VBP1P61758 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
VBP1P61758 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
VBP1P61758 MIEF2-201ENST00000323019 3364 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
VBP1P61758 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
VBP1P61758 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC13.24□□□□□ -0.29
VBP1P61758 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
VBP1P61758 SEC14L5-201ENST00000251170 6459 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
VBP1P61758 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC13.24□□□□□ -0.29
VBP1P61758 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
VBP1P61758 LIX1L-201ENST00000604000 3975 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
VBP1P61758 KDM2B-215ENST00000542973 3170 ntTSL 2 BASIC13.24□□□□□ -0.29
VBP1P61758 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
VBP1P61758 POM121L14P-201ENST00000406100 1558 ntBASIC13.24□□□□□ -0.29
VBP1P61758 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
VBP1P61758 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC13.24□□□□□ -0.29
VBP1P61758 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC13.24□□□□□ -0.29
VBP1P61758 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
VBP1P61758 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC13.24□□□□□ -0.29
VBP1P61758 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC13.24□□□□□ -0.29
VBP1P61758 INSC-207ENST00000528567 2237 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
VBP1P61758 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
VBP1P61758 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC13.24□□□□□ -0.29
VBP1P61758 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
VBP1P61758 KRT8P14-201ENST00000414254 1442 ntBASIC13.24□□□□□ -0.29
VBP1P61758 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
VBP1P61758 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC13.24□□□□□ -0.29
VBP1P61758 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
VBP1P61758 MTSS1-201ENST00000325064 2777 ntTSL 2 BASIC13.24□□□□□ -0.29
VBP1P61758 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
VBP1P61758 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
VBP1P61758 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
VBP1P61758 TUBGCP5-208ENST00000620435 3342 ntTSL 2 BASIC13.24□□□□□ -0.29
VBP1P61758 REM2-202ENST00000536884 1331 ntTSL 2 BASIC13.24□□□□□ -0.29
VBP1P61758 ZNF792-201ENST00000404801 3888 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
VBP1P61758 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC13.24□□□□□ -0.29
VBP1P61758 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
VBP1P61758 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
VBP1P61758 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
VBP1P61758 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
VBP1P61758 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC13.24□□□□□ -0.29
VBP1P61758 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC13.24□□□□□ -0.29
VBP1P61758 AP002472.1-201ENST00000577490 586 ntBASIC13.24□□□□□ -0.29
VBP1P61758 AC093458.2-201ENST00000623150 629 ntBASIC13.24□□□□□ -0.29
VBP1P61758 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
VBP1P61758 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC13.24□□□□□ -0.29
VBP1P61758 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
VBP1P61758 SCN2B-201ENST00000278947 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
VBP1P61758 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
VBP1P61758 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC13.24□□□□□ -0.29
VBP1P61758 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
VBP1P61758 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
VBP1P61758 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
VBP1P61758 RPGRIP1-202ENST00000400017 3940 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
VBP1P61758 DLX4-206ENST00000611342 1662 ntBASIC13.24□□□□□ -0.29
VBP1P61758 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC13.24□□□□□ -0.29
VBP1P61758 ZNF384-201ENST00000319770 3266 ntTSL 2 BASIC13.24□□□□□ -0.29
VBP1P61758 AC131902.2-201ENST00000566892 2172 ntBASIC13.24□□□□□ -0.29
VBP1P61758 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
VBP1P61758 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
VBP1P61758 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
VBP1P61758 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
VBP1P61758 RHPN1-AS1-201ENST00000518049 1918 ntBASIC13.23□□□□□ -0.29
VBP1P61758 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
VBP1P61758 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
VBP1P61758 VHL-201ENST00000256474 3737 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
VBP1P61758 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
VBP1P61758 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms