Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
SEC61A1P61619 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SEC61A1P61619 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SEC61A1P61619 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
SEC61A1P61619 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
SEC61A1P61619 GK-202ENST00000378941 458 ntTSL 3 BASIC13.01□□□□□ -0.33
SEC61A1P61619 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
SEC61A1P61619 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
SEC61A1P61619 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
SEC61A1P61619 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC13.01□□□□□ -0.33
SEC61A1P61619 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
SEC61A1P61619 U91328.1-201ENST00000437528 223 ntBASIC13.01□□□□□ -0.33
SEC61A1P61619 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC13.01□□□□□ -0.33
SEC61A1P61619 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC13.01□□□□□ -0.33
SEC61A1P61619 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC13.01□□□□□ -0.33
SEC61A1P61619 HNRNPA1P13-201ENST00000510646 963 ntBASIC13.01□□□□□ -0.33
SEC61A1P61619 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC13.01□□□□□ -0.33
SEC61A1P61619 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SEC61A1P61619 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC13.01□□□□□ -0.33
SEC61A1P61619 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
SEC61A1P61619 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
SEC61A1P61619 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
SEC61A1P61619 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC13.01□□□□□ -0.33
SEC61A1P61619 PAM16-204ENST00000571941 674 ntTSL 3 BASIC13.01□□□□□ -0.33
SEC61A1P61619 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC13.01□□□□□ -0.33
SEC61A1P61619 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
SEC61A1P61619 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC13.01□□□□□ -0.33
SEC61A1P61619 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
SEC61A1P61619 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SEC61A1P61619 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC13.01□□□□□ -0.33
SEC61A1P61619 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC13.01□□□□□ -0.33
SEC61A1P61619 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC13.01□□□□□ -0.33
SEC61A1P61619 AL033527.5-201ENST00000641382 801 ntBASIC13.01□□□□□ -0.33
SEC61A1P61619 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SEC61A1P61619 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
SEC61A1P61619 AC015802.1-201ENST00000588104 1449 ntBASIC13.01□□□□□ -0.33
SEC61A1P61619 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SEC61A1P61619 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SEC61A1P61619 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SEC61A1P61619 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC13.01□□□□□ -0.33
SEC61A1P61619 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
SEC61A1P61619 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
SEC61A1P61619 USP3-204ENST00000540797 5474 ntTSL 2 BASIC13.01□□□□□ -0.33
SEC61A1P61619 AL591122.2-201ENST00000624125 1853 ntBASIC13.01□□□□□ -0.33
SEC61A1P61619 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC13.01□□□□□ -0.33
SEC61A1P61619 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
SEC61A1P61619 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC13.01□□□□□ -0.33
SEC61A1P61619 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC13.01□□□□□ -0.33
SEC61A1P61619 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC13.01□□□□□ -0.33
SEC61A1P61619 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SEC61A1P61619 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SEC61A1P61619 AL139385.1-201ENST00000611744 3272 ntBASIC13.01□□□□□ -0.33
SEC61A1P61619 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SEC61A1P61619 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SEC61A1P61619 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SEC61A1P61619 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
SEC61A1P61619 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC13.01□□□□□ -0.33
SEC61A1P61619 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
SEC61A1P61619 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SEC61A1P61619 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
SEC61A1P61619 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SEC61A1P61619 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
SEC61A1P61619 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC13□□□□□ -0.33
SEC61A1P61619 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC13□□□□□ -0.33
SEC61A1P61619 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC13□□□□□ -0.33
SEC61A1P61619 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
SEC61A1P61619 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SEC61A1P61619 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC13□□□□□ -0.33
SEC61A1P61619 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SEC61A1P61619 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC13□□□□□ -0.33
SEC61A1P61619 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
SEC61A1P61619 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC13□□□□□ -0.33
SEC61A1P61619 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
SEC61A1P61619 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SEC61A1P61619 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC13□□□□□ -0.33
SEC61A1P61619 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
SEC61A1P61619 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SEC61A1P61619 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC13□□□□□ -0.33
SEC61A1P61619 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC13□□□□□ -0.33
SEC61A1P61619 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SEC61A1P61619 MXI1-205ENST00000393134 889 ntTSL 2 BASIC13□□□□□ -0.33
SEC61A1P61619 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC13□□□□□ -0.33
SEC61A1P61619 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC13□□□□□ -0.33
SEC61A1P61619 TTTY23B-201ENST00000442790 549 ntBASIC13□□□□□ -0.33
SEC61A1P61619 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC13□□□□□ -0.33
SEC61A1P61619 GLI4-203ENST00000517468 963 ntTSL 5 BASIC13□□□□□ -0.33
SEC61A1P61619 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC13□□□□□ -0.33
SEC61A1P61619 AL359711.2-201ENST00000563105 872 ntBASIC13□□□□□ -0.33
SEC61A1P61619 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC13□□□□□ -0.33
SEC61A1P61619 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC13□□□□□ -0.33
SEC61A1P61619 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC13□□□□□ -0.33
SEC61A1P61619 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC13□□□□□ -0.33
SEC61A1P61619 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC13□□□□□ -0.33
SEC61A1P61619 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
SEC61A1P61619 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SEC61A1P61619 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC13□□□□□ -0.33
SEC61A1P61619 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SEC61A1P61619 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SEC61A1P61619 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SEC61A1P61619 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms