Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC13.58□□□□□ -0.24
CLDN20P56880 RPS2P32-201ENST00000439199 892 ntBASIC13.58□□□□□ -0.24
CLDN20P56880 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CLDN20P56880 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC13.58□□□□□ -0.24
CLDN20P56880 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC13.58□□□□□ -0.24
CLDN20P56880 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC13.58□□□□□ -0.24
CLDN20P56880 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC13.58□□□□□ -0.24
CLDN20P56880 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC13.58□□□□□ -0.24
CLDN20P56880 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC13.58□□□□□ -0.24
CLDN20P56880 MIR6752-201ENST00000618442 71 ntBASIC13.58□□□□□ -0.24
CLDN20P56880 AC006453.4-201ENST00000636949 1252 ntBASIC13.58□□□□□ -0.24
CLDN20P56880 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC13.58□□□□□ -0.24
CLDN20P56880 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CLDN20P56880 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CLDN20P56880 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CLDN20P56880 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CLDN20P56880 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
CLDN20P56880 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CLDN20P56880 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CLDN20P56880 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
CLDN20P56880 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
CLDN20P56880 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC13.58□□□□□ -0.24
CLDN20P56880 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CLDN20P56880 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CLDN20P56880 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
CLDN20P56880 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CLDN20P56880 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CLDN20P56880 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
CLDN20P56880 ACE3P-201ENST00000423435 1973 ntBASIC13.58□□□□□ -0.24
CLDN20P56880 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CLDN20P56880 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CLDN20P56880 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CLDN20P56880 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CLDN20P56880 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CLDN20P56880 CR383656.2-201ENST00000548656 2254 ntBASIC13.57□□□□□ -0.24
CLDN20P56880 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
CLDN20P56880 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC13.57□□□□□ -0.24
CLDN20P56880 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CLDN20P56880 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CLDN20P56880 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CLDN20P56880 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC13.57□□□□□ -0.24
CLDN20P56880 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC13.57□□□□□ -0.24
CLDN20P56880 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC13.57□□□□□ -0.24
CLDN20P56880 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC13.57□□□□□ -0.24
CLDN20P56880 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC13.57□□□□□ -0.24
CLDN20P56880 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CLDN20P56880 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC13.57□□□□□ -0.24
CLDN20P56880 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
CLDN20P56880 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
CLDN20P56880 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC13.57□□□□□ -0.24
CLDN20P56880 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CLDN20P56880 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC13.57□□□□□ -0.24
CLDN20P56880 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CLDN20P56880 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC13.57□□□□□ -0.24
CLDN20P56880 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CLDN20P56880 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC13.57□□□□□ -0.24
CLDN20P56880 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC13.57□□□□□ -0.24
CLDN20P56880 AC079316.1-201ENST00000548397 411 ntBASIC13.57□□□□□ -0.24
CLDN20P56880 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CLDN20P56880 RPS15-202ENST00000585665 467 ntTSL 3 BASIC13.57□□□□□ -0.24
CLDN20P56880 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC13.57□□□□□ -0.24
CLDN20P56880 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC13.57□□□□□ -0.24
CLDN20P56880 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CLDN20P56880 AL354989.2-201ENST00000435838 1540 ntBASIC13.57□□□□□ -0.24
CLDN20P56880 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CLDN20P56880 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CLDN20P56880 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC13.57□□□□□ -0.24
CLDN20P56880 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CLDN20P56880 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
CLDN20P56880 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
CLDN20P56880 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC13.57□□□□□ -0.24
CLDN20P56880 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
CLDN20P56880 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC13.57□□□□□ -0.24
CLDN20P56880 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC13.57□□□□□ -0.24
CLDN20P56880 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CLDN20P56880 PPT1-213ENST00000641319 2388 ntBASIC13.57□□□□□ -0.24
CLDN20P56880 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CLDN20P56880 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CLDN20P56880 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC13.56□□□□□ -0.24
CLDN20P56880 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CLDN20P56880 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
CLDN20P56880 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
CLDN20P56880 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC13.56□□□□□ -0.24
CLDN20P56880 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CLDN20P56880 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CLDN20P56880 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC13.56□□□□□ -0.24
CLDN20P56880 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CLDN20P56880 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CLDN20P56880 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CLDN20P56880 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC13.56□□□□□ -0.24
CLDN20P56880 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC13.56□□□□□ -0.24
CLDN20P56880 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC13.56□□□□□ -0.24
CLDN20P56880 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC13.56□□□□□ -0.24
CLDN20P56880 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CLDN20P56880 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC13.56□□□□□ -0.24
CLDN20P56880 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CLDN20P56880 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
CLDN20P56880 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC13.56□□□□□ -0.24
CLDN20P56880 CD8B2-202ENST00000417670 633 ntBASIC13.56□□□□□ -0.24
CLDN20P56880 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms