Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 WASH4P-201ENST00000564273 1246 ntBASIC14.46□□□□□ -0.09
CDH13P55290 LINC02560-201ENST00000596379 459 ntBASIC14.46□□□□□ -0.09
CDH13P55290 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
CDH13P55290 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CDH13P55290 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
CDH13P55290 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC14.46□□□□□ -0.09
CDH13P55290 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDH13P55290 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDH13P55290 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC14.46□□□□□ -0.09
CDH13P55290 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
CDH13P55290 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CDH13P55290 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
CDH13P55290 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CDH13P55290 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.1
CDH13P55290 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CDH13P55290 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC14.46□□□□□ -0.1
CDH13P55290 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CDH13P55290 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC14.46□□□□□ -0.1
CDH13P55290 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CDH13P55290 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC14.46□□□□□ -0.1
CDH13P55290 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
CDH13P55290 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
CDH13P55290 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CDH13P55290 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDH13P55290 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDH13P55290 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
CDH13P55290 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDH13P55290 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC14.45□□□□□ -0.1
CDH13P55290 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CDH13P55290 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CDH13P55290 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC14.45□□□□□ -0.1
CDH13P55290 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDH13P55290 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC14.45□□□□□ -0.1
CDH13P55290 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDH13P55290 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDH13P55290 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CDH13P55290 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDH13P55290 NSL1-201ENST00000366976 722 ntTSL 2 BASIC14.45□□□□□ -0.1
CDH13P55290 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC14.45□□□□□ -0.1
CDH13P55290 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC14.45□□□□□ -0.1
CDH13P55290 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDH13P55290 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC14.45□□□□□ -0.1
CDH13P55290 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDH13P55290 AC022137.2-201ENST00000503482 481 ntBASIC14.45□□□□□ -0.1
CDH13P55290 AC027796.2-201ENST00000575326 344 ntBASIC14.45□□□□□ -0.1
CDH13P55290 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDH13P55290 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC14.45□□□□□ -0.1
CDH13P55290 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
CDH13P55290 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC14.45□□□□□ -0.1
CDH13P55290 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC14.45□□□□□ -0.1
CDH13P55290 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC14.45□□□□□ -0.1
CDH13P55290 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
CDH13P55290 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDH13P55290 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDH13P55290 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC14.45□□□□□ -0.1
CDH13P55290 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
CDH13P55290 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CDH13P55290 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
CDH13P55290 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CDH13P55290 AC011840.2-201ENST00000563063 1520 ntBASIC14.45□□□□□ -0.1
CDH13P55290 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CDH13P55290 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC14.45□□□□□ -0.1
CDH13P55290 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDH13P55290 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
CDH13P55290 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC14.45□□□□□ -0.1
CDH13P55290 MBLAC2-202ENST00000514906 1936 ntBASIC14.45□□□□□ -0.1
CDH13P55290 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDH13P55290 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CDH13P55290 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDH13P55290 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDH13P55290 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDH13P55290 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDH13P55290 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDH13P55290 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDH13P55290 CLUHP2-201ENST00000426660 1303 ntBASIC14.44□□□□□ -0.1
CDH13P55290 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDH13P55290 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
CDH13P55290 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
CDH13P55290 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
CDH13P55290 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDH13P55290 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDH13P55290 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDH13P55290 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDH13P55290 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
CDH13P55290 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CDH13P55290 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC14.44□□□□□ -0.1
CDH13P55290 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC14.44□□□□□ -0.1
CDH13P55290 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
CDH13P55290 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC14.44□□□□□ -0.1
CDH13P55290 AL162726.2-201ENST00000438986 1017 ntBASIC14.44□□□□□ -0.1
CDH13P55290 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC14.44□□□□□ -0.1
CDH13P55290 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
CDH13P55290 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC14.44□□□□□ -0.1
CDH13P55290 GCOM2-201ENST00000509133 1104 ntBASIC14.44□□□□□ -0.1
CDH13P55290 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC14.44□□□□□ -0.1
CDH13P55290 RN7SL204P-201ENST00000582831 262 ntBASIC14.44□□□□□ -0.1
CDH13P55290 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
CDH13P55290 AC126335.2-201ENST00000623362 4637 ntBASIC14.44□□□□□ -0.1
CDH13P55290 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDH13P55290 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms