Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 CDC23-208ENST00000505120 455 ntTSL 3 BASIC14.53□□□□□ -0.08
CDKN2DP55273 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC14.53□□□□□ -0.08
CDKN2DP55273 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
CDKN2DP55273 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
CDKN2DP55273 RPL28-206ENST00000558752 671 ntTSL 3 BASIC14.53□□□□□ -0.08
CDKN2DP55273 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDKN2DP55273 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC14.53□□□□□ -0.08
CDKN2DP55273 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CDKN2DP55273 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
CDKN2DP55273 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CDKN2DP55273 MIR600HG-201ENST00000449175 5984 ntBASIC14.53□□□□□ -0.08
CDKN2DP55273 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
CDKN2DP55273 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDKN2DP55273 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDKN2DP55273 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDKN2DP55273 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC14.53□□□□□ -0.08
CDKN2DP55273 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CDKN2DP55273 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.53□□□□□ -0.08
CDKN2DP55273 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CDKN2DP55273 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
CDKN2DP55273 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC14.53□□□□□ -0.08
CDKN2DP55273 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
CDKN2DP55273 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDKN2DP55273 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.53□□□□□ -0.08
CDKN2DP55273 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CDKN2DP55273 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CDKN2DP55273 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CDKN2DP55273 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
CDKN2DP55273 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CDKN2DP55273 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
CDKN2DP55273 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
CDKN2DP55273 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CDKN2DP55273 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
CDKN2DP55273 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CDKN2DP55273 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC14.52□□□□□ -0.08
CDKN2DP55273 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CDKN2DP55273 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC14.52□□□□□ -0.08
CDKN2DP55273 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC14.52□□□□□ -0.08
CDKN2DP55273 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CDKN2DP55273 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
CDKN2DP55273 AL354989.2-201ENST00000435838 1540 ntBASIC14.52□□□□□ -0.08
CDKN2DP55273 TCAM1P-207ENST00000485295 1537 ntBASIC14.52□□□□□ -0.08
CDKN2DP55273 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CDKN2DP55273 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
CDKN2DP55273 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC14.52□□□□□ -0.08
CDKN2DP55273 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC14.52□□□□□ -0.08
CDKN2DP55273 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
CDKN2DP55273 AC104581.4-201ENST00000623126 3052 ntBASIC14.52□□□□□ -0.08
CDKN2DP55273 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
CDKN2DP55273 SNX21-203ENST00000372541 771 ntTSL 2 BASIC14.52□□□□□ -0.09
CDKN2DP55273 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CDKN2DP55273 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CDKN2DP55273 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CDKN2DP55273 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.52□□□□□ -0.09
CDKN2DP55273 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CDKN2DP55273 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CDKN2DP55273 NME2P1-201ENST00000426182 414 ntBASIC14.52□□□□□ -0.09
CDKN2DP55273 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC14.52□□□□□ -0.09
CDKN2DP55273 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC14.52□□□□□ -0.09
CDKN2DP55273 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC14.52□□□□□ -0.09
CDKN2DP55273 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC14.52□□□□□ -0.09
CDKN2DP55273 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC14.52□□□□□ -0.09
CDKN2DP55273 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDKN2DP55273 COX5BP1-201ENST00000507622 393 ntBASIC14.52□□□□□ -0.09
CDKN2DP55273 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC14.52□□□□□ -0.09
CDKN2DP55273 RN7SL713P-201ENST00000582127 302 ntBASIC14.52□□□□□ -0.09
CDKN2DP55273 MIR3197-201ENST00000582241 73 ntBASIC14.52□□□□□ -0.09
CDKN2DP55273 AL358472.3-201ENST00000608147 415 ntBASIC14.52□□□□□ -0.09
CDKN2DP55273 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC14.52□□□□□ -0.09
CDKN2DP55273 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC14.52□□□□□ -0.09
CDKN2DP55273 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC14.52□□□□□ -0.09
CDKN2DP55273 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC14.52□□□□□ -0.09
CDKN2DP55273 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.52□□□□□ -0.09
CDKN2DP55273 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
CDKN2DP55273 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CDKN2DP55273 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDKN2DP55273 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDKN2DP55273 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDKN2DP55273 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDKN2DP55273 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDKN2DP55273 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
CDKN2DP55273 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDKN2DP55273 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC14.52□□□□□ -0.09
CDKN2DP55273 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
CDKN2DP55273 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC14.52□□□□□ -0.09
CDKN2DP55273 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC14.52□□□□□ -0.09
CDKN2DP55273 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC14.52□□□□□ -0.09
CDKN2DP55273 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CDKN2DP55273 KRT8P24-201ENST00000560290 1559 ntBASIC14.51□□□□□ -0.09
CDKN2DP55273 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
CDKN2DP55273 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC14.51□□□□□ -0.09
CDKN2DP55273 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDKN2DP55273 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC14.51□□□□□ -0.09
CDKN2DP55273 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDKN2DP55273 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
CDKN2DP55273 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDKN2DP55273 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
CDKN2DP55273 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDKN2DP55273 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDKN2DP55273 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms