Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
GTF2A1P52655 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
GTF2A1P52655 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
GTF2A1P52655 FANCA-202ENST00000389301 5451 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
GTF2A1P52655 CEACAM20-203ENST00000614924 1809 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
GTF2A1P52655 FBN3-201ENST00000270509 9232 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
GTF2A1P52655 HDAC8-207ENST00000373573 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
GTF2A1P52655 GRM4-206ENST00000544773 2983 ntTSL 2 BASIC14.48□□□□□ -0.09
GTF2A1P52655 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
GTF2A1P52655 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
GTF2A1P52655 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC14.48□□□□□ -0.09
GTF2A1P52655 KCNH1-202ENST00000367007 3445 ntTSL 5 BASIC14.48□□□□□ -0.09
GTF2A1P52655 OS9-203ENST00000389142 2457 ntTSL 5 BASIC14.48□□□□□ -0.09
GTF2A1P52655 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
GTF2A1P52655 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
GTF2A1P52655 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC14.48□□□□□ -0.09
GTF2A1P52655 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC14.48□□□□□ -0.09
GTF2A1P52655 ZNF197-204ENST00000383745 2935 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
GTF2A1P52655 EPHA1-201ENST00000275815 3363 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
GTF2A1P52655 NCLP1-201ENST00000445357 1963 ntBASIC14.48□□□□□ -0.09
GTF2A1P52655 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
GTF2A1P52655 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
GTF2A1P52655 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
GTF2A1P52655 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
GTF2A1P52655 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC14.48□□□□□ -0.09
GTF2A1P52655 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC14.48□□□□□ -0.09
GTF2A1P52655 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC14.48□□□□□ -0.09
GTF2A1P52655 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC14.48□□□□□ -0.09
GTF2A1P52655 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
GTF2A1P52655 ARTN-206ENST00000472435 402 ntTSL 3 BASIC14.48□□□□□ -0.09
GTF2A1P52655 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
GTF2A1P52655 SDCCAG3P1-201ENST00000589292 1150 ntBASIC14.48□□□□□ -0.09
GTF2A1P52655 MTDHP3-201ENST00000594186 672 ntBASIC14.48□□□□□ -0.09
GTF2A1P52655 AL732292.2-201ENST00000609649 430 ntBASIC14.48□□□□□ -0.09
GTF2A1P52655 BSG-214ENST00000614867 960 ntTSL 3 BASIC14.48□□□□□ -0.09
GTF2A1P52655 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC14.48□□□□□ -0.09
GTF2A1P52655 CRHR2-201ENST00000341843 3131 ntTSL 5 BASIC14.48□□□□□ -0.09
GTF2A1P52655 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
GTF2A1P52655 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
GTF2A1P52655 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
GTF2A1P52655 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC14.48□□□□□ -0.09
GTF2A1P52655 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC14.48□□□□□ -0.09
GTF2A1P52655 DIAPH2-203ENST00000373049 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
GTF2A1P52655 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC14.48□□□□□ -0.09
GTF2A1P52655 KPNA4-201ENST00000334256 8981 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
GTF2A1P52655 LINC00656-201ENST00000443744 1896 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
GTF2A1P52655 PAX8-205ENST00000429538 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
GTF2A1P52655 WT1-AS-201ENST00000395900 3828 ntTSL 2 BASIC14.48□□□□□ -0.09
GTF2A1P52655 BHMT2-201ENST00000255192 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
GTF2A1P52655 IDO2-204ENST00000502986 2294 ntTSL 5 BASIC14.48□□□□□ -0.09
GTF2A1P52655 CICP7-201ENST00000432723 2477 ntBASIC14.48□□□□□ -0.09
GTF2A1P52655 ENOX2-204ENST00000394363 4174 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
GTF2A1P52655 MRVI1-202ENST00000424001 5815 ntTSL 5 BASIC14.47□□□□□ -0.09
GTF2A1P52655 TTYH3-204ENST00000407643 4537 ntTSL 5 BASIC14.47□□□□□ -0.09
GTF2A1P52655 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
GTF2A1P52655 MYO9B-206ENST00000595618 7623 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
GTF2A1P52655 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
GTF2A1P52655 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC14.47□□□□□ -0.09
GTF2A1P52655 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
GTF2A1P52655 TBX4-202ENST00000393853 3398 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
GTF2A1P52655 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
GTF2A1P52655 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC14.47□□□□□ -0.09
GTF2A1P52655 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
GTF2A1P52655 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
GTF2A1P52655 DIP2C-205ENST00000634311 4961 ntTSL 5 BASIC14.47□□□□□ -0.09
GTF2A1P52655 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC14.47□□□□□ -0.09
GTF2A1P52655 RSPO2-202ENST00000517781 2748 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
GTF2A1P52655 AC092028.1-202ENST00000641483 3547 ntBASIC14.47□□□□□ -0.09
GTF2A1P52655 AC092028.1-201ENST00000641781 3540 ntBASIC14.47□□□□□ -0.09
GTF2A1P52655 PPP6R2-209ENST00000612753 4104 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
GTF2A1P52655 SPHK2-208ENST00000599029 3085 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
GTF2A1P52655 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
GTF2A1P52655 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
GTF2A1P52655 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC14.47□□□□□ -0.09
GTF2A1P52655 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
GTF2A1P52655 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
GTF2A1P52655 SLC4A5-204ENST00000377634 3814 ntAPPRIS P4 TSL 5 BASIC14.47□□□□□ -0.09
GTF2A1P52655 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
GTF2A1P52655 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
GTF2A1P52655 NME3-204ENST00000563498 920 ntTSL 2 BASIC14.47□□□□□ -0.09
GTF2A1P52655 AL049597.2-201ENST00000565575 961 ntBASIC14.47□□□□□ -0.09
GTF2A1P52655 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC14.47□□□□□ -0.09
GTF2A1P52655 RPS15-207ENST00000591032 550 ntTSL 3 BASIC14.47□□□□□ -0.09
GTF2A1P52655 RPS15-212ENST00000593052 629 ntTSL 2 BASIC14.47□□□□□ -0.09
GTF2A1P52655 MTDHP4-201ENST00000600287 670 ntBASIC14.47□□□□□ -0.09
GTF2A1P52655 AC069148.1-201ENST00000608741 768 ntBASIC14.47□□□□□ -0.09
GTF2A1P52655 WT1-AS_2.1-201ENST00000613208 137 ntBASIC14.47□□□□□ -0.09
GTF2A1P52655 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
GTF2A1P52655 PER3-208ENST00000613533 6318 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
GTF2A1P52655 PCCB-210ENST00000471595 6090 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
GTF2A1P52655 GREB1-206ENST00000396123 5296 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
GTF2A1P52655 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
GTF2A1P52655 RBP3-201ENST00000584701 4276 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
GTF2A1P52655 GDPD5-202ENST00000443276 3106 ntTSL 5 BASIC14.47□□□□□ -0.09
GTF2A1P52655 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
GTF2A1P52655 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
GTF2A1P52655 KCNMA1-208ENST00000372440 3849 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
GTF2A1P52655 KCNMA1-227ENST00000638203 3840 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
GTF2A1P52655 KCNMA1-233ENST00000638351 3849 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
GTF2A1P52655 ARID4A-202ENST00000355431 5891 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 510 ms