Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.38■□□□□ 0.05
CLCN4P51793 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CLCN4P51793 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
CLCN4P51793 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CLCN4P51793 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
CLCN4P51793 CYP51A1P3-201ENST00000400072 1428 ntBASIC15.38■□□□□ 0.05
CLCN4P51793 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CLCN4P51793 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CLCN4P51793 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CLCN4P51793 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
CLCN4P51793 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CLCN4P51793 RPL13AP19-201ENST00000434320 584 ntBASIC15.38■□□□□ 0.05
CLCN4P51793 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC15.38■□□□□ 0.05
CLCN4P51793 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
CLCN4P51793 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC15.38■□□□□ 0.05
CLCN4P51793 DUX4L50-201ENST00000455245 715 ntBASIC15.38■□□□□ 0.05
CLCN4P51793 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC15.38■□□□□ 0.05
CLCN4P51793 IGHV3-37-201ENST00000518544 340 ntBASIC15.38■□□□□ 0.05
CLCN4P51793 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC15.38■□□□□ 0.05
CLCN4P51793 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC15.38■□□□□ 0.05
CLCN4P51793 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC15.38■□□□□ 0.05
CLCN4P51793 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC15.38■□□□□ 0.05
CLCN4P51793 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CLCN4P51793 AL022334.2-201ENST00000610000 484 ntBASIC15.38■□□□□ 0.05
CLCN4P51793 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CLCN4P51793 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CLCN4P51793 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CLCN4P51793 TCAF2P1-201ENST00000291129 2421 ntBASIC15.38■□□□□ 0.05
CLCN4P51793 MECR-202ENST00000373791 2416 ntTSL 2 BASIC15.38■□□□□ 0.05
CLCN4P51793 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
CLCN4P51793 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
CLCN4P51793 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CLCN4P51793 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
CLCN4P51793 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CLCN4P51793 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
CLCN4P51793 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC15.38■□□□□ 0.05
CLCN4P51793 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC15.38■□□□□ 0.05
CLCN4P51793 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CLCN4P51793 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CLCN4P51793 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CLCN4P51793 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CLCN4P51793 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC15.38■□□□□ 0.05
CLCN4P51793 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC15.38■□□□□ 0.05
CLCN4P51793 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CLCN4P51793 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC15.37■□□□□ 0.05
CLCN4P51793 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CLCN4P51793 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC15.37■□□□□ 0.05
CLCN4P51793 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC15.37■□□□□ 0.05
CLCN4P51793 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC15.37■□□□□ 0.05
CLCN4P51793 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
CLCN4P51793 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
CLCN4P51793 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC15.37■□□□□ 0.05
CLCN4P51793 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
CLCN4P51793 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC15.37■□□□□ 0.05
CLCN4P51793 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
CLCN4P51793 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CLCN4P51793 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CLCN4P51793 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
CLCN4P51793 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CLCN4P51793 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC15.37■□□□□ 0.05
CLCN4P51793 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC15.37■□□□□ 0.05
CLCN4P51793 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC15.37■□□□□ 0.05
CLCN4P51793 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC15.37■□□□□ 0.05
CLCN4P51793 BUD31-205ENST00000456893 512 ntTSL 5 BASIC15.37■□□□□ 0.05
CLCN4P51793 RN7SL81P-201ENST00000493781 261 ntBASIC15.37■□□□□ 0.05
CLCN4P51793 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC15.37■□□□□ 0.05
CLCN4P51793 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC15.37■□□□□ 0.05
CLCN4P51793 MIR6858-201ENST00000620733 67 ntBASIC15.37■□□□□ 0.05
CLCN4P51793 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC15.37■□□□□ 0.05
CLCN4P51793 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC15.37■□□□□ 0.05
CLCN4P51793 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CLCN4P51793 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CLCN4P51793 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC15.37■□□□□ 0.05
CLCN4P51793 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CLCN4P51793 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CLCN4P51793 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CLCN4P51793 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CLCN4P51793 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
CLCN4P51793 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
CLCN4P51793 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CLCN4P51793 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
CLCN4P51793 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CLCN4P51793 AC025271.4-201ENST00000621477 1726 ntBASIC15.37■□□□□ 0.05
CLCN4P51793 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
CLCN4P51793 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CLCN4P51793 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC15.37■□□□□ 0.05
CLCN4P51793 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
CLCN4P51793 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.36■□□□□ 0.05
CLCN4P51793 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC15.36■□□□□ 0.05
CLCN4P51793 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLCN4P51793 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
CLCN4P51793 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC15.36■□□□□ 0.05
CLCN4P51793 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CLCN4P51793 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CLCN4P51793 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLCN4P51793 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CLCN4P51793 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CLCN4P51793 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC15.36■□□□□ 0.05
CLCN4P51793 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
CLCN4P51793 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms