Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC16.17■□□□□ 0.18
CDK7P50613 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CDK7P50613 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CDK7P50613 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
CDK7P50613 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
CDK7P50613 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC16.17■□□□□ 0.18
CDK7P50613 AL354861.1-201ENST00000445213 355 ntBASIC16.17■□□□□ 0.18
CDK7P50613 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC16.17■□□□□ 0.18
CDK7P50613 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC16.17■□□□□ 0.18
CDK7P50613 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC16.17■□□□□ 0.18
CDK7P50613 C2orf69P1-201ENST00000563532 1093 ntBASIC16.17■□□□□ 0.18
CDK7P50613 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC16.17■□□□□ 0.18
CDK7P50613 NUDT4P2-201ENST00000578341 546 ntBASIC16.17■□□□□ 0.18
CDK7P50613 MIR3180-2-201ENST00000581748 88 ntBASIC16.17■□□□□ 0.18
CDK7P50613 AC005041.3-201ENST00000606287 649 ntBASIC16.17■□□□□ 0.18
CDK7P50613 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDK7P50613 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.17■□□□□ 0.18
CDK7P50613 HLA-DQB1-202ENST00000399079 1501 ntBASIC16.17■□□□□ 0.18
CDK7P50613 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDK7P50613 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDK7P50613 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CDK7P50613 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.17■□□□□ 0.18
CDK7P50613 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDK7P50613 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
CDK7P50613 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDK7P50613 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CDK7P50613 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC16.17■□□□□ 0.18
CDK7P50613 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CDK7P50613 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDK7P50613 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.17■□□□□ 0.18
CDK7P50613 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC16.17■□□□□ 0.18
CDK7P50613 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDK7P50613 F10-203ENST00000409306 1450 ntTSL 3 BASIC16.16■□□□□ 0.18
CDK7P50613 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CDK7P50613 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDK7P50613 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDK7P50613 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDK7P50613 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDK7P50613 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CDK7P50613 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDK7P50613 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.16■□□□□ 0.18
CDK7P50613 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC16.16■□□□□ 0.18
CDK7P50613 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC16.16■□□□□ 0.18
CDK7P50613 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDK7P50613 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC16.16■□□□□ 0.18
CDK7P50613 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDK7P50613 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
CDK7P50613 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDK7P50613 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDK7P50613 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
CDK7P50613 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CDK7P50613 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC16.16■□□□□ 0.18
CDK7P50613 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC16.16■□□□□ 0.18
CDK7P50613 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC16.16■□□□□ 0.18
CDK7P50613 AC010234.1-201ENST00000494599 870 ntBASIC16.16■□□□□ 0.18
CDK7P50613 REEP5-205ENST00000504247 480 ntTSL 5 BASIC16.16■□□□□ 0.18
CDK7P50613 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC16.16■□□□□ 0.18
CDK7P50613 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC16.16■□□□□ 0.18
CDK7P50613 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDK7P50613 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC16.16■□□□□ 0.18
CDK7P50613 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC16.16■□□□□ 0.18
CDK7P50613 AL022334.2-201ENST00000610000 484 ntBASIC16.16■□□□□ 0.18
CDK7P50613 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC16.16■□□□□ 0.18
CDK7P50613 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CDK7P50613 LINC01815-202ENST00000641468 1409 ntBASIC16.16■□□□□ 0.18
CDK7P50613 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC16.16■□□□□ 0.18
CDK7P50613 MARK2P16-201ENST00000605714 1723 ntBASIC16.16■□□□□ 0.18
CDK7P50613 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDK7P50613 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDK7P50613 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDK7P50613 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDK7P50613 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDK7P50613 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDK7P50613 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CDK7P50613 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
CDK7P50613 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.15■□□□□ 0.18
CDK7P50613 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDK7P50613 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDK7P50613 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.15■□□□□ 0.18
CDK7P50613 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDK7P50613 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDK7P50613 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CDK7P50613 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC16.15■□□□□ 0.18
CDK7P50613 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
CDK7P50613 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDK7P50613 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CDK7P50613 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDK7P50613 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDK7P50613 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDK7P50613 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CDK7P50613 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CDK7P50613 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDK7P50613 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDK7P50613 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CDK7P50613 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC16.15■□□□□ 0.18
CDK7P50613 PPOX-204ENST00000462866 473 ntTSL 5 BASIC16.15■□□□□ 0.18
CDK7P50613 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC16.15■□□□□ 0.18
CDK7P50613 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC16.15■□□□□ 0.18
CDK7P50613 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CDK7P50613 MT3-203ENST00000565838 421 ntTSL 3 BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms