Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC13.17□□□□□ -0.3
SRP9P49458 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SRP9P49458 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
SRP9P49458 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SRP9P49458 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC13.17□□□□□ -0.3
SRP9P49458 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SRP9P49458 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC13.17□□□□□ -0.3
SRP9P49458 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC13.17□□□□□ -0.3
SRP9P49458 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
SRP9P49458 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
SRP9P49458 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
SRP9P49458 AC016397.2-201ENST00000624848 1985 ntBASIC13.16□□□□□ -0.3
SRP9P49458 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SRP9P49458 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SRP9P49458 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
SRP9P49458 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
SRP9P49458 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SRP9P49458 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SRP9P49458 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SRP9P49458 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
SRP9P49458 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SRP9P49458 NSL1-201ENST00000366976 722 ntTSL 2 BASIC13.16□□□□□ -0.3
SRP9P49458 METTL26-204ENST00000397665 558 ntTSL 2 BASIC13.16□□□□□ -0.3
SRP9P49458 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC13.16□□□□□ -0.3
SRP9P49458 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
SRP9P49458 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC13.16□□□□□ -0.3
SRP9P49458 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SRP9P49458 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC13.16□□□□□ -0.3
SRP9P49458 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC13.16□□□□□ -0.3
SRP9P49458 GPX4-206ENST00000588919 803 ntTSL 2 BASIC13.16□□□□□ -0.3
SRP9P49458 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC13.16□□□□□ -0.3
SRP9P49458 CHCHD2P3-201ENST00000603038 451 ntBASIC13.16□□□□□ -0.3
SRP9P49458 AC008494.3-201ENST00000606615 944 ntBASIC13.16□□□□□ -0.3
SRP9P49458 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SRP9P49458 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SRP9P49458 AL645728.2-202ENST00000641679 227 ntBASIC13.16□□□□□ -0.3
SRP9P49458 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC13.16□□□□□ -0.3
SRP9P49458 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SRP9P49458 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC13.16□□□□□ -0.3
SRP9P49458 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC13.16□□□□□ -0.3
SRP9P49458 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SRP9P49458 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC13.16□□□□□ -0.3
SRP9P49458 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SRP9P49458 AC083964.2-201ENST00000623988 2396 ntBASIC13.16□□□□□ -0.3
SRP9P49458 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC13.16□□□□□ -0.3
SRP9P49458 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SRP9P49458 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
SRP9P49458 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC13.16□□□□□ -0.3
SRP9P49458 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SRP9P49458 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
SRP9P49458 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
SRP9P49458 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
SRP9P49458 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SRP9P49458 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC13.15□□□□□ -0.3
SRP9P49458 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC13.15□□□□□ -0.3
SRP9P49458 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SRP9P49458 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
SRP9P49458 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
SRP9P49458 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC13.15□□□□□ -0.3
SRP9P49458 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC13.15□□□□□ -0.3
SRP9P49458 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC13.15□□□□□ -0.3
SRP9P49458 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SRP9P49458 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SRP9P49458 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SRP9P49458 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SRP9P49458 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SRP9P49458 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SRP9P49458 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SRP9P49458 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
SRP9P49458 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
SRP9P49458 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC13.15□□□□□ -0.3
SRP9P49458 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC13.15□□□□□ -0.3
SRP9P49458 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC13.15□□□□□ -0.3
SRP9P49458 TPT1P11-201ENST00000458482 498 ntBASIC13.15□□□□□ -0.3
SRP9P49458 LHX6-205ENST00000464484 666 ntTSL 2 BASIC13.15□□□□□ -0.3
SRP9P49458 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC13.15□□□□□ -0.3
SRP9P49458 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
SRP9P49458 AC092552.1-201ENST00000547243 906 ntBASIC13.15□□□□□ -0.3
SRP9P49458 SPDYE22P-201ENST00000582158 798 ntBASIC13.15□□□□□ -0.3
SRP9P49458 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC13.15□□□□□ -0.3
SRP9P49458 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
SRP9P49458 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC13.15□□□□□ -0.3
SRP9P49458 BRI3BPP1-201ENST00000594224 787 ntBASIC13.15□□□□□ -0.3
SRP9P49458 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC13.15□□□□□ -0.3
SRP9P49458 AC133539.2-201ENST00000604757 467 ntBASIC13.15□□□□□ -0.3
SRP9P49458 AC093813.1-201ENST00000605066 256 ntBASIC13.15□□□□□ -0.3
SRP9P49458 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC13.15□□□□□ -0.3
SRP9P49458 SERF2-217ENST00000630046 862 ntTSL 5 BASIC13.15□□□□□ -0.3
SRP9P49458 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
SRP9P49458 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
SRP9P49458 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
SRP9P49458 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
SRP9P49458 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SRP9P49458 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC13.15□□□□□ -0.3
SRP9P49458 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SRP9P49458 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
SRP9P49458 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SRP9P49458 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
SRP9P49458 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SRP9P49458 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms