Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CENPAP49450 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC13.49□□□□□ -0.25
CENPAP49450 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
CENPAP49450 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
CENPAP49450 BX640514.1-201ENST00000583223 1918 ntBASIC13.49□□□□□ -0.25
CENPAP49450 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC13.48□□□□□ -0.25
CENPAP49450 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CENPAP49450 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CENPAP49450 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC13.48□□□□□ -0.25
CENPAP49450 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CENPAP49450 SFMBT2-204ENST00000397167 8024 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
CENPAP49450 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC13.48□□□□□ -0.25
CENPAP49450 CACNA1C-214ENST00000399634 7590 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
CENPAP49450 CACNA1C-222ENST00000406454 7590 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
CENPAP49450 AC015802.1-201ENST00000588104 1449 ntBASIC13.48□□□□□ -0.25
CENPAP49450 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CENPAP49450 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CENPAP49450 PITPNM3-202ENST00000421306 6945 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
CENPAP49450 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CENPAP49450 SNX33-201ENST00000308527 8008 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CENPAP49450 ZNF318-201ENST00000361428 8006 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CENPAP49450 CACNA1G-207ENST00000429973 7120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CENPAP49450 CACNA1G-217ENST00000507336 7116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CENPAP49450 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
CENPAP49450 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC13.48□□□□□ -0.25
CENPAP49450 ZNF654-204ENST00000636215 6446 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
CENPAP49450 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CENPAP49450 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CENPAP49450 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CENPAP49450 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CENPAP49450 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CENPAP49450 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC13.48□□□□□ -0.25
CENPAP49450 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC13.48□□□□□ -0.25
CENPAP49450 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC13.48□□□□□ -0.25
CENPAP49450 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC13.48□□□□□ -0.25
CENPAP49450 AP001582.1-201ENST00000525856 295 ntBASIC13.48□□□□□ -0.25
CENPAP49450 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CENPAP49450 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC13.48□□□□□ -0.25
CENPAP49450 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC13.48□□□□□ -0.25
CENPAP49450 RRP7BP-205ENST00000566851 833 ntBASIC13.48□□□□□ -0.25
CENPAP49450 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CENPAP49450 BX539320.1-201ENST00000623759 877 ntBASIC13.48□□□□□ -0.25
CENPAP49450 ORC5-208ENST00000626700 344 ntTSL 3 BASIC13.48□□□□□ -0.25
CENPAP49450 TP73-203ENST00000357733 4899 ntTSL 5 BASIC13.48□□□□□ -0.25
CENPAP49450 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
CENPAP49450 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC13.48□□□□□ -0.25
CENPAP49450 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC13.48□□□□□ -0.25
CENPAP49450 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CENPAP49450 MVP-202ENST00000395353 2925 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
CENPAP49450 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CENPAP49450 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
CENPAP49450 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CENPAP49450 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC13.48□□□□□ -0.25
CENPAP49450 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC13.48□□□□□ -0.25
CENPAP49450 NR3C2-203ENST00000358102 5893 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CENPAP49450 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
CENPAP49450 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CENPAP49450 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
CENPAP49450 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CENPAP49450 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CENPAP49450 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CENPAP49450 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13.48□□□□□ -0.25
CENPAP49450 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC13.47□□□□□ -0.25
CENPAP49450 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CENPAP49450 FAM157A-203ENST00000634862 6083 ntTSL 5 BASIC13.47□□□□□ -0.25
CENPAP49450 INF2-202ENST00000330634 7578 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
CENPAP49450 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
CENPAP49450 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC13.47□□□□□ -0.25
CENPAP49450 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CENPAP49450 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
CENPAP49450 TNS1-207ENST00000430930 5900 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CENPAP49450 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
CENPAP49450 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CENPAP49450 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CENPAP49450 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC13.47□□□□□ -0.25
CENPAP49450 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
CENPAP49450 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CENPAP49450 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
CENPAP49450 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CENPAP49450 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CENPAP49450 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CENPAP49450 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CENPAP49450 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CENPAP49450 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC13.47□□□□□ -0.25
CENPAP49450 AC134915.1-201ENST00000426461 574 ntBASIC13.47□□□□□ -0.25
CENPAP49450 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC13.47□□□□□ -0.25
CENPAP49450 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC13.47□□□□□ -0.25
CENPAP49450 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
CENPAP49450 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC13.47□□□□□ -0.25
CENPAP49450 CD81-207ENST00000481687 890 ntTSL 2 BASIC13.47□□□□□ -0.25
CENPAP49450 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC13.47□□□□□ -0.25
CENPAP49450 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
CENPAP49450 AC005498.2-205ENST00000593218 784 ntBASIC13.47□□□□□ -0.25
CENPAP49450 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC13.47□□□□□ -0.25
CENPAP49450 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
CENPAP49450 GPALPP1-207ENST00000611650 899 ntBASIC13.47□□□□□ -0.25
CENPAP49450 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
CENPAP49450 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC13.47□□□□□ -0.25
CENPAP49450 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC13.47□□□□□ -0.25
CENPAP49450 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms