Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
CSNK1A1P48729 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CSNK1A1P48729 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC13.15□□□□□ -0.3
CSNK1A1P48729 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CSNK1A1P48729 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CSNK1A1P48729 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
CSNK1A1P48729 AC097359.2-201ENST00000604992 2389 ntBASIC13.15□□□□□ -0.3
CSNK1A1P48729 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
CSNK1A1P48729 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CSNK1A1P48729 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CSNK1A1P48729 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CSNK1A1P48729 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CSNK1A1P48729 PDIA3P1-201ENST00000471856 1510 ntBASIC13.15□□□□□ -0.3
CSNK1A1P48729 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CSNK1A1P48729 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CSNK1A1P48729 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CSNK1A1P48729 POLL-206ENST00000370172 2308 ntTSL 2 BASIC13.15□□□□□ -0.3
CSNK1A1P48729 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC13.15□□□□□ -0.3
CSNK1A1P48729 AC015688.4-201ENST00000580780 1647 ntBASIC13.15□□□□□ -0.3
CSNK1A1P48729 AC006001.1-201ENST00000325130 474 ntBASIC13.15□□□□□ -0.3
CSNK1A1P48729 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CSNK1A1P48729 MIR1202-201ENST00000408529 83 ntBASIC13.15□□□□□ -0.3
CSNK1A1P48729 USB1-202ENST00000423271 1217 ntTSL 2 BASIC13.15□□□□□ -0.3
CSNK1A1P48729 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC13.15□□□□□ -0.3
CSNK1A1P48729 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC13.15□□□□□ -0.3
CSNK1A1P48729 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC13.15□□□□□ -0.3
CSNK1A1P48729 COX5BP1-201ENST00000507622 393 ntBASIC13.15□□□□□ -0.3
CSNK1A1P48729 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC13.15□□□□□ -0.3
CSNK1A1P48729 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC13.15□□□□□ -0.3
CSNK1A1P48729 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC13.15□□□□□ -0.3
CSNK1A1P48729 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC13.15□□□□□ -0.3
CSNK1A1P48729 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC13.15□□□□□ -0.3
CSNK1A1P48729 RAB43P1-201ENST00000561790 589 ntBASIC13.15□□□□□ -0.3
CSNK1A1P48729 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC13.15□□□□□ -0.3
CSNK1A1P48729 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC13.15□□□□□ -0.3
CSNK1A1P48729 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC13.15□□□□□ -0.3
CSNK1A1P48729 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC13.15□□□□□ -0.3
CSNK1A1P48729 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC13.15□□□□□ -0.3
CSNK1A1P48729 AL162274.1-201ENST00000617191 1098 ntBASIC13.15□□□□□ -0.3
CSNK1A1P48729 AL035252.4-201ENST00000624174 288 ntBASIC13.15□□□□□ -0.3
CSNK1A1P48729 AC002472.3-201ENST00000640124 621 ntBASIC13.15□□□□□ -0.3
CSNK1A1P48729 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CSNK1A1P48729 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CSNK1A1P48729 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
CSNK1A1P48729 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CSNK1A1P48729 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC13.15□□□□□ -0.3
CSNK1A1P48729 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CSNK1A1P48729 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CSNK1A1P48729 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC13.15□□□□□ -0.3
CSNK1A1P48729 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
CSNK1A1P48729 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CSNK1A1P48729 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
CSNK1A1P48729 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CSNK1A1P48729 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CSNK1A1P48729 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC13.15□□□□□ -0.3
CSNK1A1P48729 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC13.15□□□□□ -0.3
CSNK1A1P48729 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
CSNK1A1P48729 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
CSNK1A1P48729 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
CSNK1A1P48729 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CSNK1A1P48729 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CSNK1A1P48729 AHCYP2-201ENST00000430630 1300 ntBASIC13.14□□□□□ -0.31
CSNK1A1P48729 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC13.14□□□□□ -0.31
CSNK1A1P48729 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CSNK1A1P48729 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CSNK1A1P48729 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC13.14□□□□□ -0.31
CSNK1A1P48729 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC13.14□□□□□ -0.31
CSNK1A1P48729 AC009093.2-202ENST00000620513 2079 ntBASIC13.14□□□□□ -0.31
CSNK1A1P48729 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
CSNK1A1P48729 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CSNK1A1P48729 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CSNK1A1P48729 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CSNK1A1P48729 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC13.14□□□□□ -0.31
CSNK1A1P48729 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC13.14□□□□□ -0.31
CSNK1A1P48729 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
CSNK1A1P48729 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC13.14□□□□□ -0.31
CSNK1A1P48729 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CSNK1A1P48729 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CSNK1A1P48729 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC13.14□□□□□ -0.31
CSNK1A1P48729 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CSNK1A1P48729 GZMB-202ENST00000382540 816 ntTSL 5 BASIC13.14□□□□□ -0.31
CSNK1A1P48729 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CSNK1A1P48729 AC004945.1-201ENST00000416738 983 ntBASIC13.14□□□□□ -0.31
CSNK1A1P48729 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC13.14□□□□□ -0.31
CSNK1A1P48729 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC13.14□□□□□ -0.31
CSNK1A1P48729 RPL7P3-201ENST00000441388 714 ntBASIC13.14□□□□□ -0.31
CSNK1A1P48729 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC13.14□□□□□ -0.31
CSNK1A1P48729 KLF2P4-201ENST00000451959 1225 ntBASIC13.14□□□□□ -0.31
CSNK1A1P48729 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CSNK1A1P48729 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC13.14□□□□□ -0.31
CSNK1A1P48729 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC13.14□□□□□ -0.31
CSNK1A1P48729 NAA50-208ENST00000497255 789 ntTSL 5 BASIC13.14□□□□□ -0.31
CSNK1A1P48729 ALG3P1-201ENST00000508806 1114 ntBASIC13.14□□□□□ -0.31
CSNK1A1P48729 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CSNK1A1P48729 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC13.14□□□□□ -0.31
CSNK1A1P48729 AP000812.2-201ENST00000538934 718 ntBASIC13.14□□□□□ -0.31
CSNK1A1P48729 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CSNK1A1P48729 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
CSNK1A1P48729 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC13.14□□□□□ -0.31
CSNK1A1P48729 RN7SL713P-201ENST00000582127 302 ntBASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms