Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC14.86□□□□□ -0.03
CHRNA4P43681 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CHRNA4P43681 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC14.86□□□□□ -0.03
CHRNA4P43681 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC14.86□□□□□ -0.03
CHRNA4P43681 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC14.86□□□□□ -0.03
CHRNA4P43681 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CHRNA4P43681 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC14.86□□□□□ -0.03
CHRNA4P43681 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC14.86□□□□□ -0.03
CHRNA4P43681 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC14.86□□□□□ -0.03
CHRNA4P43681 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC14.86□□□□□ -0.03
CHRNA4P43681 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC14.86□□□□□ -0.03
CHRNA4P43681 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC14.86□□□□□ -0.03
CHRNA4P43681 AC008687.7-202ENST00000637404 953 ntBASIC14.86□□□□□ -0.03
CHRNA4P43681 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CHRNA4P43681 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CHRNA4P43681 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CHRNA4P43681 AL928921.2-201ENST00000641325 2442 ntBASIC14.86□□□□□ -0.03
CHRNA4P43681 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CHRNA4P43681 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CHRNA4P43681 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CHRNA4P43681 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.86□□□□□ -0.03
CHRNA4P43681 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.86□□□□□ -0.03
CHRNA4P43681 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CHRNA4P43681 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
CHRNA4P43681 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.86□□□□□ -0.03
CHRNA4P43681 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CHRNA4P43681 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
CHRNA4P43681 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CHRNA4P43681 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CHRNA4P43681 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CHRNA4P43681 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CHRNA4P43681 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CHRNA4P43681 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CHRNA4P43681 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC14.86□□□□□ -0.03
CHRNA4P43681 KRT8P28-201ENST00000433288 1390 ntBASIC14.85□□□□□ -0.03
CHRNA4P43681 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
CHRNA4P43681 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CHRNA4P43681 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CHRNA4P43681 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CHRNA4P43681 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CHRNA4P43681 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
CHRNA4P43681 CICP16-201ENST00000502609 2813 ntBASIC14.85□□□□□ -0.03
CHRNA4P43681 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
CHRNA4P43681 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
CHRNA4P43681 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC14.85□□□□□ -0.03
CHRNA4P43681 CNTNAP3P2-201ENST00000617175 3861 ntBASIC14.85□□□□□ -0.03
CHRNA4P43681 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CHRNA4P43681 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CHRNA4P43681 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
CHRNA4P43681 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
CHRNA4P43681 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CHRNA4P43681 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CHRNA4P43681 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC14.85□□□□□ -0.03
CHRNA4P43681 TPO-206ENST00000382269 1155 ntTSL 5 BASIC14.85□□□□□ -0.03
CHRNA4P43681 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC14.85□□□□□ -0.03
CHRNA4P43681 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
CHRNA4P43681 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
CHRNA4P43681 HLA-V-201ENST00000429037 534 ntBASIC14.85□□□□□ -0.03
CHRNA4P43681 CICP12-201ENST00000455801 843 ntBASIC14.85□□□□□ -0.03
CHRNA4P43681 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC14.85□□□□□ -0.03
CHRNA4P43681 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC14.85□□□□□ -0.03
CHRNA4P43681 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC14.85□□□□□ -0.03
CHRNA4P43681 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CHRNA4P43681 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC14.85□□□□□ -0.03
CHRNA4P43681 AL136301.1-201ENST00000615830 422 ntBASIC14.85□□□□□ -0.03
CHRNA4P43681 MVK-217ENST00000639206 367 ntTSL 5 BASIC14.85□□□□□ -0.03
CHRNA4P43681 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC14.85□□□□□ -0.03
CHRNA4P43681 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CHRNA4P43681 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC14.85□□□□□ -0.03
CHRNA4P43681 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
CHRNA4P43681 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC14.85□□□□□ -0.03
CHRNA4P43681 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CHRNA4P43681 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CHRNA4P43681 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CHRNA4P43681 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CHRNA4P43681 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CHRNA4P43681 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CHRNA4P43681 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC14.85□□□□□ -0.03
CHRNA4P43681 AC090505.1-201ENST00000430515 1834 ntBASIC14.85□□□□□ -0.03
CHRNA4P43681 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC14.85□□□□□ -0.03
CHRNA4P43681 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
CHRNA4P43681 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHRNA4P43681 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHRNA4P43681 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC14.84□□□□□ -0.03
CHRNA4P43681 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHRNA4P43681 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CHRNA4P43681 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.84□□□□□ -0.03
CHRNA4P43681 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.84□□□□□ -0.03
CHRNA4P43681 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHRNA4P43681 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHRNA4P43681 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHRNA4P43681 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CHRNA4P43681 AC097376.2-205ENST00000610159 5334 ntBASIC14.84□□□□□ -0.03
CHRNA4P43681 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHRNA4P43681 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHRNA4P43681 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC14.84□□□□□ -0.03
CHRNA4P43681 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CHRNA4P43681 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
CHRNA4P43681 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CHRNA4P43681 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms